RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 COG7P83436 770 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 EML3Q32P44 896 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 TPRG1Q6ZUI0 275 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 FBXL6Q8N531 539 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 TC2NQ8N9U0 490 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 LRRN4CLQ8ND94 238 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 FLCNQ8NFG4 579 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 TTC8Q8TAM2 541 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 TTYH3Q9C0H2 523 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 TBC1D17Q9HA65 648 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 MARCH2Q9P0N8 246 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 STRIP2Q9ULQ0 834 aa17.52■□□□□ 0.4
SDCBP-201ENST00000260130 CHRNB2P17787 502 aa17.52■□□□□ 0.39
SDCBP-201ENST00000260130 TERF2Q15554 542 aa17.52■□□□□ 0.39
SDCBP-201ENST00000260130 ATP2A3Q93084 1043 aa17.52■□□□□ 0.39
SDCBP-201ENST00000260130 FAM149B1Q96BN6 582 aa17.52■□□□□ 0.39
SDCBP-201ENST00000260130 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.39
SDCBP-201ENST00000260130 SYNCQ9H7C4 482 aa17.52■□□□□ 0.39
SDCBP-201ENST00000260130 C8orf33Q9H7E9 229 aaPredicted RBP17.52■□□□□ 0.39
SDCBP-201ENST00000260130 TBC1D14Q9P2M4 693 aa17.52■□□□□ 0.39
SDCBP-201ENST00000260130 OTOL1A6NHN0 477 aaPredicted RBP17.51■□□□□ 0.39
SDCBP-201ENST00000260130 LRRC53A6NM62 1247 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 SCAMP3O14828 347 aaKnown RBP17.51■□□□□ 0.39
SDCBP-201ENST00000260130 FMO1Q01740 532 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 PTPN20Q4JDL3 420 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 HTR3DQ70Z44 454 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 IRF2BP2Q7Z5L9 587 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 ADGRG2Q8IZP9 1017 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 IPO4Q8TEX9 1081 aaKnown RBP17.51■□□□□ 0.39
SDCBP-201ENST00000260130 WBP2Q969T9 261 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 ECT2Q9H8V3 914 aa17.51■□□□□ 0.39
SDCBP-201ENST00000260130 KANSL1LA0AUZ9 987 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 MAN2B1O00754 1011 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 ERBB2P04626 1255 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CD72P21854 359 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CLCN5P51795 746 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 TMCO3Q6UWJ1 677 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 ZNF852Q6ZMS4 543 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 ERICH1Q86X53 443 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 SUGP1Q8IWZ8 645 aaKnown RBP17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CPA6Q8N4T0 437 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 MSANTD3Q96H12 275 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 LSM7Q9UK45 103 aaKnown RBP17.5■□□□□ 0.39
SDCBP-201ENST00000260130 SHISA7A6NL88 538 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 GREM1O60565 184 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CYP1A1P04798 512 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-201ENST00000260130 FYNP06241 537 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 NCAM1P13591 858 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 SOX9P48436 509 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 GNG11P61952 73 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 YWHAZP63104 245 aaKnown RBP17.5■□□□□ 0.39
SDCBP-201ENST00000260130 NOMO3P69849 1222 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CWF19L1Q69YN2 538 aaKnown RBP17.5■□□□□ 0.39
SDCBP-201ENST00000260130 OR6B2Q6IFH4 312 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 TRIM72Q6ZMU5 477 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 BEND5Q7L4P6 421 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 RALGPS2Q86X27 583 aaPredicted RBP17.5■□□□□ 0.39
SDCBP-201ENST00000260130 OTUB2Q96DC9 234 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 C18orf8Q96DM3 657 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 TRIM62Q9BVG3 475 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 CARD6Q9BX69 1037 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 SFMBT1Q9UHJ3 866 aa17.5■□□□□ 0.39
SDCBP-201ENST00000260130 A0A1W2PQJ5 194 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 SLC12A8A0AV02 714 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 SPECC1L-ADORA2AF8WAN1 911 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 STC2O76061 302 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 NFATC1O95644 943 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 HMBSP08397 361 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 GABRB2P47870 512 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 ADKP55263 362 aaKnown RBP17.49■□□□□ 0.39
SDCBP-201ENST00000260130 NR1H3Q13133 447 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 EFHC1Q5JVL4 640 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 NAA35Q5VZE5 725 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 ASTLQ6HA08 431 aaPredicted RBP17.49■□□□□ 0.39
SDCBP-201ENST00000260130 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 C1orf228Q6PIY5 440 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 FAM183BPQ6ZVS7 135 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 ZDHHC17Q8IUH5 632 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 BBS7Q8IWZ6 715 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 MSANTD4Q8NCY6 345 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 FAM3CQ92520 227 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 IQCDQ96DY2 449 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 PIWIL1Q96J94 861 aaKnown RBP17.49■□□□□ 0.39
SDCBP-201ENST00000260130 PANX2Q96RD6 677 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 NELL2Q99435 816 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 AGPAT1Q99943 283 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 POPDC2Q9HBU9 364 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 AIPL1Q9NZN9 384 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 NAALADL1Q9UQQ1 740 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 HELZP42694 1942 aaKnown RBP17.49■□□□□ 0.39
SDCBP-201ENST00000260130 CAPN9O14815 690 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 GLI1P08151 1106 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 CTHP32929 405 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 SLC6A3Q01959 620 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 TAF5Q15542 800 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 SFMBT2Q5VUG0 894 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 PCDHB18PQ96TA0 734 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 FOXQ1Q9C009 403 aa17.49■□□□□ 0.39
SDCBP-201ENST00000260130 ASNSD1Q9NWL6 643 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms