RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 KLHL35Q6PF15 583 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 IYDQ6PHW0 289 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 TICAM1Q8IUC6 712 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 ADGRF2Q8IZF7 708 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 FNIP1Q8TF40 1166 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 BSNDQ8WZ55 320 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 BIRC8Q96P09 236 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 ZC3H12CQ9C0D7 883 aaKnown RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 ZNF232Q9UNY5 417 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 WDR37Q9Y2I8 494 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 THSD7AQ9UPZ6 1657 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 H0YCG3 227 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 LYPLA1O75608 230 aaPredicted RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 SERPINE1P05121 402 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 FGF3P11487 239 aaPredicted RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 COX4I1P13073 169 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 NCF2P19878 526 aaPredicted RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 CDH5P33151 784 aaPredicted RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 SLC44A4Q53GD3 710 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 MROH9Q5TGP6 573 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 LRRC8BQ6P9F7 803 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 TRMT1LQ7Z2T5 733 aaKnown RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 ACMSDQ8TDX5 336 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 SNRNP27Q8WVK2 155 aaKnown RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 SMYD2Q9NRG4 433 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 RAB6BQ9NRW1 208 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 FAF1Q9UNN5 650 aaPredicted RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 GNEQ9Y223 722 aaKnown RBP11.88□□□□□ -0.51
TROAP-201ENST00000257909 NUB1Q9Y5A7 615 aa11.88□□□□□ -0.51
TROAP-201ENST00000257909 EP400Q96L91 3159 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 LOC100653049A0A140TA62 436 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 SPDYE2BA6NHP3 402 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 FAM159BA6NKW6 160 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 H3BSA7 217 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 GLRA3O75311 464 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 KRT34O76011 436 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 SERPINB2P05120 415 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 SPDYE6P0CI01 402 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 CSH1P0DML2 217 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 CSH2P0DML3 217 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 KRT3P12035 628 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 IDO1P14902 403 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 SFNP31947 248 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 LIG4P49917 911 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 HSD17B4P51659 736 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 MTMR1Q13613 665 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 NOMO1Q15155 1222 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 SPDYE2Q495Y8 402 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 SMYD1Q8NB12 490 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 GSDMBQ8TAX9 411 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 TRPC4APQ8TEL6 797 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 ATP2A3Q93084 1043 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 IMPG2Q9BZV3 1241 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 UBIAD1Q9Y5Z9 338 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 UGT1A9O60656 530 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 GSRP00390 522 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 HOXA10P31260 410 aaPredicted RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 RFC1P35251 1148 aaPredicted RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 MAGEA10P43363 369 aaPredicted RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 CDK9P50750 372 aaKnown RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 DHRS4L2Q6PKH6 230 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 MAVSQ7Z434 540 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 LDHDQ86WU2 507 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 ARFGAP1Q8N6T3 406 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 TRIM56Q9BRZ2 755 aaKnown RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 MRIQ9BWK5 157 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 INO80BQ9C086 356 aaPredicted RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 UGT1A7Q9HAW7 530 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 UGT1A10Q9HAW8 530 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 UGT1A8Q9HAW9 530 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 PLGRKTQ9HBL7 147 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 ZNHIT2Q9UHR6 403 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
TROAP-201ENST00000257909 RIMS3Q9UJD0 308 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 PCDHGB4Q9UN71 923 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 PCDHGB5Q9Y5G0 923 aa11.87□□□□□ -0.51
TROAP-201ENST00000257909 SH3PXD2BA1X283 911 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 HMX2A2RU54 273 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 SPDYE16A6NNV3 312 aaPredicted RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 WDR64B1ANS9 1081 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 ZNF23P17027 643 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 NRLP54845 237 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 RAB15P59190 212 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
TROAP-201ENST00000257909 JAG1P78504 1218 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 PHEXP78562 749 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 CYP4A22Q5TCH4 519 aa11.86□□□□□ -0.51
TROAP-201ENST00000257909 GPAT2Q6NUI2 795 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms