RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SEMA4AQ9H3S1 761 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 NMUR1Q9HB89 426 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 KCNK9Q9NPC2 374 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 CALCOCO1Q9P1Z2 691 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 STAP1Q9ULZ2 295 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 GOLGA8RI6L899 631 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 KRT7P08729 469 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 NEFHP12036 1026 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 TPI1P60174 286 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 TFDP3Q5H9I0 405 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 IZUMO3Q5VZ72 239 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 C4orf50Q6ZRC1 276 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 DENND5BQ6ZUT9 1274 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 SLFN11Q7Z7L1 901 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 SLC22A17Q8WUG5 538 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 CFAP36Q96G28 342 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 SLITRK1Q96PX8 696 aa12.1□□□□□ -0.47
LIN28A-201ENST00000254231 A0A0A6YYK5 440 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 TPH1P17752 444 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 EPHB4P54760 987 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 ZNF268Q14587 947 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 PLEKHG4Q58EX7 1191 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 ZBED8Q8IZ13 594 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 RYBPQ8N488 228 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 OR6K2Q8NGY2 324 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 KCND1Q9NSA2 647 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 NCANO14594 1321 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 C2CD4BA6NLJ0 364 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 EEF2KO00418 725 aaKnown RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 FGBP02675 491 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 IFNAR2P48551 515 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 ZNF143P52747 638 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 YWHAGP61981 247 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 OLFML1Q6UWY5 402 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CORO1BQ9BR76 489 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 PCDHB5Q9Y5E4 795 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 SF3B1O75533 1304 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 A0A0U1RQS6 177 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CCDC151A5D8V7 595 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 ANKRD65E5RJM6 399 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CCL16O15467 120 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CXCL14O95715 111 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 GNRH1P01148 92 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 URODP06132 367 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 MAXP61244 160 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 LONRF1Q17RB8 773 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 RAP1GAP2Q684P5 730 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 UNC93AQ86WB7 457 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 NT5DC4Q86YG4 428 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CCDC13Q8IYE1 715 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 TMEM199Q8N511 208 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 TOP6BLQ8N6T0 577 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 NAT16Q8N8M0 369 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 RBM41Q96IZ5 413 aaKnown RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 RPRD1AQ96P16 312 aaPredicted RBP12.09□□□□□ -0.47
LIN28A-201ENST00000254231 RTP3Q9BQQ7 232 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 OR12D3Q9UGF7 316 aa12.09□□□□□ -0.47
LIN28A-201ENST00000254231 CNOT1A5YKK6 2376 aaKnown RBP12.08□□□□□ -0.47
LIN28A-201ENST00000254231 ATP9BO43861 1147 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 PIRTP0C851 137 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 CHKAP35790 457 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 KCNQ1P51787 676 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 SNX16P57768 344 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 INCA1Q0VD86 236 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 EFHC1Q5JVL4 640 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 BEND6Q5SZJ8 279 aaPredicted RBP12.08□□□□□ -0.48
LIN28A-201ENST00000254231 C11orf63Q6NUN7 778 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 MAB21L3Q8N8X9 362 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 DNAAF3Q8N9W5 541 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 POPDC2Q9HBU9 364 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 KLHL8Q9P2G9 620 aaPredicted RBP12.08□□□□□ -0.48
LIN28A-201ENST00000254231 CDH9Q9ULB4 789 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 RBBP6Q7Z6E9 1792 aaKnown RBP12.08□□□□□ -0.48
LIN28A-201ENST00000254231 PHF2O75151 1096 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 SKIP12755 728 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 TXNDC8Q6A555 127 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 TAC4Q86UU9 113 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 ANKRD7Q92527 254 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 CASP10Q92851 521 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 ERP44Q9BS26 406 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 TSEN34Q9BSV6 310 aaKnown RBP12.08□□□□□ -0.48
LIN28A-201ENST00000254231 KANSL3Q9P2N6 904 aa12.08□□□□□ -0.48
LIN28A-201ENST00000254231 PMM2O15305 246 aa12.07□□□□□ -0.48
LIN28A-201ENST00000254231 ZNF623O75123 536 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms