RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 SMOQ99835 787 aa15.29■□□□□ 0.04
MBD4-201ENST00000249910 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
MBD4-201ENST00000249910 ULBP1Q9BZM6 244 aa15.29■□□□□ 0.04
MBD4-201ENST00000249910 A0A1W2PPM1 405 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 FYNP06241 537 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 ABHD2P08910 425 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 ELK3P41970 407 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 LPIN1Q14693 890 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 KCNT2Q6UVM3 1135 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 TP53INP2Q8IXH6 220 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 PALM2Q8IXS6 379 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 TTC25Q96NG3 672 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 LGMNQ99538 433 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 CEP41Q9BYV8 373 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 UPF3AQ9H1J1 476 aaKnown RBP15.28■□□□□ 0.04
MBD4-201ENST00000249910 CHST12Q9NRB3 414 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 PIGVQ9NUD9 493 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 RABGEF1Q9UJ41 708 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 TGM2P21980 687 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 FBF1Q8TES7 1133 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
MBD4-201ENST00000249910 ANLNQ9NQW6 1124 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 DTLQ9NZJ0 730 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 LGALS13Q9UHV8 139 aa15.28■□□□□ 0.04
MBD4-201ENST00000249910 I6L893 689 aaPredicted RBP15.27■□□□□ 0.04
MBD4-201ENST00000249910 CAPN9O14815 690 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 METTL18O95568 372 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 ATP5DP30049 168 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 ITGA7Q13683 1181 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 SWT1Q5T5J6 900 aaKnown RBP15.27■□□□□ 0.04
MBD4-201ENST00000249910 CCSAPQ6IQ19 270 aaPredicted RBP15.27■□□□□ 0.04
MBD4-201ENST00000249910 FAM35AQ86V20 835 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 SLC7A14Q8TBB6 771 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 EDEM1Q92611 657 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 TSPAN18Q96SJ8 248 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 TMEM209Q96SK2 561 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 ETNK1Q9HBU6 452 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 GIT1Q9Y2X7 761 aa15.27■□□□□ 0.04
MBD4-201ENST00000249910 A0A0U1RQF3 1178 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 GRIA1P42261 906 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 CORO7P57737 925 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 KCNJ11Q14654 390 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 RNF187Q5TA31 235 aaPredicted RBP15.27■□□□□ 0.03
MBD4-201ENST00000249910 NCBP2-AS2Q69YL0 99 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 TADA2BQ86TJ2 420 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 HACE1Q8IYU2 909 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 KLHDC9Q8NEP7 349 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 CABS1Q96KC9 395 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 RTP3Q9BQQ7 232 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 PRDM16Q9HAZ2 1276 aa15.27■□□□□ 0.03
MBD4-201ENST00000249910 PDCD11Q14690 1871 aaKnown RBP15.27■□□□□ 0.03
MBD4-201ENST00000249910 SRRM3A6NNA2 597 aaPredicted RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 TCP11X1B4DZS4 312 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 FAM72CH0Y354 149 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 NCAM1P13591 858 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 BDNFP23560 247 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 LHX1P48742 406 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 LIG3P49916 1009 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 RNASELQ05823 741 aaKnown RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 FAM72AQ5TYM5 149 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 GKAP1Q5VSY0 366 aaPredicted RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 FAM72DQ6L9T8 149 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 CEP128Q6ZU80 1094 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 STRADAQ7RTN6 431 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 TRABD2AQ86V40 505 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 FAM72BQ86X60 149 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 KLF6Q99612 283 aaPredicted RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 ELAC2Q9BQ52 826 aaKnown RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 POPDC2Q9HBU9 364 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 PIH1D1Q9NWS0 290 aaKnown RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 FZD10Q9ULW2 581 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 KBTBD13C9JR72 458 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 E7ESA3 106 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 GOLGA8RI6L899 631 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 NOS2P35228 1153 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 SP3Q02447 781 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 SPRED3Q2MJR0 410 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 ARCQ7LC44 396 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 ATP11CQ8NB49 1132 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 NPY6RQ99463 290 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 TRPV6Q9H1D0 765 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 C12orf65Q9H3J6 166 aaKnown RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 CYLDQ9NQC7 956 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 ARHGEF4Q9NR80 690 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 TMLHEQ9NVH6 421 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 FGFR1OP2Q9NVK5 253 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 PAK5Q9P286 719 aa15.26■□□□□ 0.03
MBD4-201ENST00000249910 ZMYND8Q9ULU4 1186 aaPredicted RBP15.26■□□□□ 0.03
MBD4-201ENST00000249910 BCLAF3A2AJT9 711 aaKnown RBP15.25■□□□□ 0.03
MBD4-201ENST00000249910 KIF3CO14782 793 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 ARL4AP40617 200 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 YWHAGP61981 247 aaKnown RBP eCLIP15.25■□□□□ 0.03
MBD4-201ENST00000249910 DEUP1Q05D60 604 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 IFRD2Q12894 506 aaPredicted RBP15.25■□□□□ 0.03
MBD4-201ENST00000249910 LRRTM3Q86VH5 581 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 NT5C3BQ969T7 300 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 PAFAH2Q99487 392 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 MRPL42Q9Y6G3 142 aaKnown RBP15.25■□□□□ 0.03
MBD4-201ENST00000249910 USP3Q9Y6I4 520 aa15.25■□□□□ 0.03
MBD4-201ENST00000249910 TTC3P53804 2025 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms