RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 CRELD2Q6UXH1 353 aaPredicted RBP12.67□□□□□ -0.38
RFPL3-201ENST00000249007 MYCT1Q8N699 235 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 WBP2Q969T9 261 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 HIC2Q96JB3 615 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 NACA2Q9H009 215 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 MARK1Q9P0L2 795 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 ODF2LQ9ULJ1 636 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 CLCA2Q9UQC9 943 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
RFPL3-201ENST00000249007 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
RFPL3-201ENST00000249007 CKAP5Q14008 2032 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 DOPEY1Q5JWR5 2465 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 CCDC66A2RUB6 948 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 CLGNO14967 610 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 NPC1O15118 1278 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 ITGAVP06756 1048 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 PLA2G4BP0C869 781 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 ABCB4P21439 1286 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 YWHAQP27348 245 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 ACSL1P33121 698 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 TRAPPC10P48553 1259 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 VAC14Q08AM6 782 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 ARSHQ5FYA8 562 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 SCARA3Q6AZY7 606 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 DHX40Q8IX18 779 aaKnown RBP12.66□□□□□ -0.38
RFPL3-201ENST00000249007 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 CACTINQ8WUQ7 758 aaKnown RBP12.66□□□□□ -0.38
RFPL3-201ENST00000249007 SNRNP27Q8WVK2 155 aaKnown RBP12.66□□□□□ -0.38
RFPL3-201ENST00000249007 KBTBD7Q8WVZ9 684 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 OVCA2Q8WZ82 227 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 BHMTQ93088 406 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 FBXO32Q969P5 355 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 BIRC7Q96CA5 298 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 PLIN2Q99541 437 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 REEP2Q9BRK0 252 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 FAM117AQ9C073 453 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 FOXP1Q9H334 677 aaPredicted RBP12.66□□□□□ -0.38
RFPL3-201ENST00000249007 CCSER2Q9H7U1 834 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 PARVGQ9HBI0 331 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 ITGA11Q9UKX5 1188 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 STYXL1Q9Y6J8 313 aa12.66□□□□□ -0.38
RFPL3-201ENST00000249007 TP53BP1Q12888 1972 aaPredicted RBP12.66□□□□□ -0.38
RFPL3-201ENST00000249007 KLK10O43240 276 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 FAM13AO94988 1023 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CD27P26842 260 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ABCD1P33897 745 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 TUBP50607 506 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 COPAP53621 1224 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CDH8P55286 799 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 WNT7BP56706 349 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 C21orf59P57076 290 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 NFATC3Q12968 1075 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ILKQ13418 452 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ENPP2Q13822 863 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 PRAMEF14Q5SWL7 426 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CACTIN-AS1Q8N1I8 211 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 KCTD17Q8N5Z5 321 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 EID2Q8N6I1 236 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 DCBLD1Q8N8Z6 715 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 KCNE4Q8WWG9 221 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 TSC1Q92574 1164 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 FAM84AQ96KN4 292 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ZNF578Q96N58 590 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 GBP4Q96PP9 640 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ELF4Q99607 663 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ACE2Q9BYF1 805 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 TMEM30AQ9NV96 361 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 THAP10Q9P2Z0 257 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CHORDC1Q9UHD1 332 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 FSBPO95073 299 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 RTN3O95197 1032 aaPredicted RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 RBP5P82980 135 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 GTF2BQ00403 316 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 GNL2Q13823 731 aaKnown RBP12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 IL17AQ16552 155 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 HYIQ5T013 277 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 DTHD1Q6ZMT9 781 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 HTR3DQ70Z44 454 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 HOMEZQ8IX15 550 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 SAP25Q8TEE9 199 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 RFFLQ8WZ73 363 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 CDK5RAP3Q96JB5 506 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 PLK2Q9NYY3 685 aa12.65□□□□□ -0.38
RFPL3-201ENST00000249007 ANKMY1Q9P2S6 941 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms