RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NDRG1Q92597 394 aaKnown RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 EDEM1Q92611 657 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 EZH1Q92800 747 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 ERGIC2Q96RQ1 377 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 PNKPQ96T60 521 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 FBRSL1Q9HCM7 1045 aaKnown RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 WDR35Q9P2L0 1181 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
VPREB3-201ENST00000248948 MUC22E2RYF6 1773 aaPredicted RBP13.35□□□□□ -0.27
VPREB3-201ENST00000248948 NYNRINQ9P2P1 1898 aaKnown RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 SPAG17Q6Q759 2223 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 SLC12A8A0AV02 714 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 PIK3R2O00459 728 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 PAPSS1O43252 624 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 CAVIN2O95810 425 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 IGLV3-27P01718 113 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 APODP05090 189 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 HOXA6P31267 233 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 KRT9P35527 623 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 ZNF165P49910 485 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 SNX16P57768 344 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 RING1Q06587 406 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 SYCP1Q15431 976 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 ANO4Q32M45 955 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 HSF5Q4G112 596 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 PASD1Q8IV76 773 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 FMNL3Q8IVF7 1028 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 PHTF2Q8N3S3 785 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 ZBTB44Q8NCP5 570 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 SERPINB11Q96P15 392 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 MIS12Q9H081 205 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 ARHGEF4Q9NR80 690 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
VPREB3-201ENST00000248948 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
VPREB3-201ENST00000248948 SYCE3A1L190 88 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 K7ESF4 209 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 LILRB5O75023 590 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 TULP3O75386 442 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 KAT7O95251 611 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 KLKB1P03952 638 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 GLI1P08151 1106 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 TYRP14679 529 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 CDK11BP21127 795 aaKnown RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 GRIA2P42262 883 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 HARS2P49590 506 aaKnown RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 JAM2P57087 298 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 SKOR2Q2VWA4 1001 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 TOGARAM2Q6ZUX3 1019 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 SYT13Q7L8C5 426 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 ZNF677Q86XU0 584 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 TMEM25Q86YD3 366 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 SCUBE3Q8IX30 993 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 TERB1Q8NA31 727 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 RPLP0P6Q8NHW5 317 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 NKD2Q969F2 451 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 FAM149B1Q96BN6 582 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 CPXM1Q96SM3 734 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 PHOX2BQ99453 314 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 POPDC2Q9HBU9 364 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 DEC1Q9P2X7 70 aa13.33□□□□□ -0.28
VPREB3-201ENST00000248948 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
VPREB3-201ENST00000248948 MYO18AQ92614 2054 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 A0A0A0MRY4 1105 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 CCDC163A0A0D9SF12 145 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 PRR23AA6NEV1 266 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 K7EQS6 105 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 MSI1O43347 362 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 HSF2BPO75031 334 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 FYNP06241 537 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 HMBSP08397 361 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 NCAM1P13591 858 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 SOX5P35711 763 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 KLK7P49862 253 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 MRE11P49959 708 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 MRPS21P82921 87 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 UBXN1Q04323 297 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 KDSRQ06136 332 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms