RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MPP5Q8N3R9 675 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 CSPG4P5Q96PW8 444 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 UGT1A7Q9HAW7 530 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 UGT1A10Q9HAW8 530 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 UGT1A8Q9HAW9 530 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 MTMR10Q9NXD2 777 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 KLHL14Q9P2G3 628 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 ARL2BPQ9Y2Y0 163 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 CXorf49A8MYA2 514 aaPredicted RBP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 I3L4J1 428 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 PTGESO14684 152 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 TYROBPO43914 113 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 PGK1P00558 417 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 INHBAP08476 426 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 SETSIPP0DME0 302 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 MTFR1Q15390 333 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 SLC9A4Q6AI14 798 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 SLC26A9Q7LBE3 791 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 TP53INP2Q8IXH6 220 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 GAD1Q99259 594 aa16.34■□□□□ 0.21
LRFN1-201ENST00000248668 MRPL42Q9Y6G3 142 aaKnown RBP16.34■□□□□ 0.21
LRFN1-201ENST00000248668 ENO4A6NNW6 628 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 ADAM17P78536 824 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 BMPR2Q13873 1038 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 ADGRD1Q6QNK2 874 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 ECHDC2Q86YB7 292 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 SERAC1Q96JX3 654 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 CYTH2Q99418 400 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 PLCD4Q9BRC7 762 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 KLC2Q9H0B6 622 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 ECT2Q9H8V3 914 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 ZC3H7BQ9UGR2 993 aaKnown RBP16.33■□□□□ 0.2
LRFN1-201ENST00000248668 TEX264Q9Y6I9 313 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 AP1G2O75843 785 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 MT-ND3P03897 115 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 NEFHP12036 1026 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 TGM2P21980 687 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 CPT1AP50416 773 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 KCNJ2P63252 427 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 SYPL2Q5VXT5 272 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 CYB5D1Q6P9G0 228 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 ZNF670Q9BS34 389 aa16.33■□□□□ 0.2
LRFN1-201ENST00000248668 SMG5Q9UPR3 1016 aaKnown RBP16.33■□□□□ 0.2
LRFN1-201ENST00000248668 NDC80O14777 642 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 MDM4O15151 490 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 PRPF4O43172 522 aaKnown RBP eCLIP16.32■□□□□ 0.2
LRFN1-201ENST00000248668 RASSF9O75901 435 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 INHBEP58166 350 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 SNCBQ16143 134 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 GNASQ5JWF2 1037 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 KIAA0319Q5VV43 1072 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 AP1ARQ63HQ0 302 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CAND1Q86VP6 1230 aaKnown RBP16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CRYBG2Q8N1P7 616 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 TEKT4Q8WW24 435 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 WNT8BQ93098 351 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 PAAF1Q9BRP4 392 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 RHOBTB2Q9BYZ6 727 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CASTOR2A6NHX0 329 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 EIF4E1BA6NMX2 242 aaKnown RBP16.32■□□□□ 0.2
LRFN1-201ENST00000248668 PYGBP11216 843 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 SV2CQ496J9 727 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 TTC17Q96AE7 1141 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 KCNK16Q96T55 309 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 LRRC4Q9HBW1 653 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 DTLQ9NZJ0 730 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 DCTN4Q9UJW0 460 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 SLC12A4Q9UP95 1085 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 M0QYT0 321 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 TNPO2O14787 897 aaKnown RBP16.32■□□□□ 0.2
LRFN1-201ENST00000248668 SNX16P57768 344 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CDC42EP1Q00587 391 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CASC4Q6P4E1 433 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 UNC5BQ8IZJ1 945 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 NME8Q8N427 588 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CCNYQ8ND76 341 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 FAM111AQ96PZ2 611 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
LRFN1-201ENST00000248668 CHADO15335 359 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
LRFN1-201ENST00000248668 CRYBB1P53674 252 aaPredicted RBP16.31■□□□□ 0.2
LRFN1-201ENST00000248668 DPYSL2Q16555 572 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 TRMT10BQ6PF06 316 aaKnown RBP16.31■□□□□ 0.2
LRFN1-201ENST00000248668 PARP9Q8IXQ6 854 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 VPS52Q8N1B4 723 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 TNIP3Q96KP6 325 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 NPHS2Q9NP85 383 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 SLC17A6Q9P2U8 582 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
LRFN1-201ENST00000248668 STK38LQ9Y2H1 464 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 CDY2AQ9Y6F7 541 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 XPOTO43592 962 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms