RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 NRLP54845 237 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 DPYSL2Q16555 572 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 SLC9A4Q6AI14 798 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 TTC19Q6DKK2 380 aaPredicted RBP24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 MFSD5Q6N075 450 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 STRADAQ7RTN6 431 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 TAS1R1Q7RTX1 841 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 BNIPLQ7Z465 357 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 LRRC43Q8N309 656 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 EPS8L3Q8TE67 593 aaKnown RBP24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 NT5C3BQ969T7 300 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 CAPS2Q9BXY5 557 aa24.28■■□□□ 1.48
SYNGR3-201ENST00000248121 MCF2LO15068 1137 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 RPL22P35268 128 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 YWHAZP63104 245 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 SLC25A52Q3SY17 297 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 VARS2Q5ST30 1063 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 FAM171A1Q5VUB5 890 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 C1orf228Q6PIY5 440 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 HOOK3Q86VS8 718 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 ZNF670Q9BS34 389 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 MRPL9Q9BYD2 267 aaKnown RBP24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 CWH43Q9H720 699 aa24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 FARP1Q9Y4F1 1045 aaPredicted RBP24.27■■□□□ 1.48
SYNGR3-201ENST00000248121 HHLA1C9JL84 531 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 ALDH2P05091 517 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 HPDP32754 393 aaPredicted RBP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 WDR5P61964 334 aaKnown RBP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 SKIDA1Q1XH10 827 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 PPP6R3Q5H9R7 873 aaPredicted RBP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 ZC3H18Q86VM9 953 aaKnown RBP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 FAM71DQ8N9W8 422 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 P3H4Q92791 437 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 SLC2A13Q96QE2 648 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 ULBP1Q9BZM6 244 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 FYNP06241 537 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 IRAK1P51617 712 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 MORF4L2Q15014 288 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 DCAF6Q58WW2 860 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 RAB41Q5JT25 222 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 SYPL2Q5VXT5 272 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 FUT10Q6P4F1 479 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 OTOP2Q7RTS6 562 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 SIX6OS1Q8N1H7 587 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 RSAD2Q8WXG1 361 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 PRCCQ92733 491 aaPredicted RBP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 TOP1MTQ969P6 601 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 PGM2Q96G03 612 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 KCTD15Q96SI1 283 aaPredicted RBP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 RBM15Q96T37 977 aaKnown RBP eCLIP24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 AP4E1Q9UPM8 1137 aa24.26■■□□□ 1.47
SYNGR3-201ENST00000248121 TLDC2A0PJX2 215 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 SMIM23A6NLE4 172 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 SULT1E1P49888 294 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 MAGOHP61326 146 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 C16orf59Q7L2K0 433 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 THEM5Q8N1Q8 247 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 NPY6RQ99463 290 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 FOXP3Q9BZS1 431 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 DHX35Q9H5Z1 703 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 ZNF487B1APH4 448 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 APOL1O14791 398 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 OAZ2O95190 189 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 PAX3P23760 479 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 ACTN2P35609 894 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 RTP2Q5QGT7 225 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 FAM182AQ5T1J6 154 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 ANKRD22Q5VYY1 191 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 RSPO2Q6UXX9 243 aaPredicted RBP24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 FAM131BQ86XD5 332 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 STKLD1Q8NE28 680 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 CPT1BQ92523 772 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 SMARCD1Q96GM5 515 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 C9orf72Q96LT7 481 aa24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 RC3H2Q9HBD1 1191 aaKnown RBP24.25■■□□□ 1.47
SYNGR3-201ENST00000248121 ABHD14A-ACY1A0A1B0GW23 586 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 TGM2P21980 687 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 CYP2F1P24903 491 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 NOS2P35228 1153 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 SLCO1A2P46721 670 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 DAOAP59103 153 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 GNGT1P63211 74 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 ROR1Q01973 937 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 GAD2Q05329 585 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 SLC39A12Q504Y0 691 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 LRRC31Q6UY01 552 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 PYROXD2Q8N2H3 581 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 VN1R3Q9BXE9 311 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 USP29Q9HBJ7 922 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 CSNK1G1Q9HCP0 422 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 SHOC2Q9UQ13 582 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 MYO16Q9Y6X6 1858 aa24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 ZNF638Q14966 1978 aaKnown RBP24.24■■□□□ 1.47
SYNGR3-201ENST00000248121 YJEFN3A6XGL0 299 aa24.23■■□□□ 1.47
SYNGR3-201ENST00000248121 E7ENQ6 273 aa24.23■■□□□ 1.47
SYNGR3-201ENST00000248121 TNFAIP8L3Q5GJ75 292 aa24.23■■□□□ 1.47
SYNGR3-201ENST00000248121 BHLHA9Q7RTU4 235 aa24.23■■□□□ 1.47
SYNGR3-201ENST00000248121 PKNOX2Q96KN3 472 aa24.23■■□□□ 1.47
SYNGR3-201ENST00000248121 TMEM175Q9BSA9 504 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms