RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 ENO1P06733 434 aaKnown RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 KITP10721 976 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 ZFXP17010 805 aaPredicted RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 TPSB2P20231 275 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 MAGEA3P43357 314 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 CPA2P48052 419 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 HDAC4P56524 1084 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 OCRLQ01968 901 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 TPSAB1Q15661 275 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 SNX30Q5VWJ9 437 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 ANO7Q6IWH7 933 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 ACOT1Q86TX2 421 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 TTC30AQ86WT1 665 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 IFNLR1Q8IU57 520 aaPredicted RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 SIGLEC10Q96LC7 697 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 SLC4A5Q9BY07 1137 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 PDGFCQ9NRA1 345 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 ZNF487B1APH4 448 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 B2RBV5 119 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 H3BRJ5 948 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 CAPN9O14815 690 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 IRF6O14896 467 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 PDHA1P08559 390 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 SETSIPP0DME0 302 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 CRHR1P34998 444 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 GCKP35557 465 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 ZRSR2Q15696 482 aaKnown RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 TEX44Q53QW1 395 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 ZNF534Q76KX8 674 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 TMEM110Q86TL2 294 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 NT5DC4Q86YG4 428 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 MPP5Q8N3R9 675 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 AFG1LQ8WV93 481 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 NLRP7Q8WX94 980 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 TRIM56Q9BRZ2 755 aaKnown RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 DHX35Q9H5Z1 703 aaKnown RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 XAB2Q9HCS7 855 aaKnown RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 MARCOQ9UEW3 520 aaPredicted RBP19.37■□□□□ 0.69
CPSF3-201ENST00000238112 PCDHA11Q9Y5I1 949 aa19.37■□□□□ 0.69
CPSF3-201ENST00000238112 A8MXQ7 604 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 PAPSS1O43252 624 aaPredicted RBP19.36■□□□□ 0.69
CPSF3-201ENST00000238112 AQP5P55064 265 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 MRPS35P82673 323 aaKnown RBP19.36■□□□□ 0.69
CPSF3-201ENST00000238112 GBE1Q04446 702 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 SLC34A1Q06495 639 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 TMPRSS6Q8IU80 811 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 WDR60Q8WVS4 1066 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 OTUD5Q96G74 571 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 ZNF333Q96JL9 665 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 ARHGEF4Q9NR80 690 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 A0A0G2JLL6 359 aaPredicted RBP19.36■□□□□ 0.69
CPSF3-201ENST00000238112 CAPN14A8MX76 684 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 BIRC5O15392 142 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 TOMM70O94826 608 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 BPGMP07738 259 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 NR2C2P49116 596 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 RCN2Q14257 317 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 PKDCCQ504Y2 493 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 DLK2Q6UY11 383 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 PRRT2Q7Z6L0 340 aaPredicted RBP19.36■□□□□ 0.69
CPSF3-201ENST00000238112 KHSRPQ92945 711 aaKnown RBP eCLIP19.36■□□□□ 0.696e-6■■■□□ 19
CPSF3-201ENST00000238112 MRPL45Q9BRJ2 306 aaKnown RBP19.36■□□□□ 0.69
CPSF3-201ENST00000238112 GCOM2Q9BZD3 368 aaPredicted RBP19.36■□□□□ 0.69
CPSF3-201ENST00000238112 TXNRD2Q9NNW7 524 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 SNX9Q9Y5X1 595 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 EVPLQ92817 2033 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 PTPRFP10586 1907 aa19.36■□□□□ 0.69
CPSF3-201ENST00000238112 DNAJC25-GNG10A0A024R161 153 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 A6NHS1 94 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 L1CAMP32004 1257 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 SARNPP82979 210 aaKnown RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 CDK18Q07002 472 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 DPYSL2Q16555 572 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 CES4AQ5XG92 561 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 HEATR6Q6AI08 1181 aaKnown RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 ZDHHC17Q8IUH5 632 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 STKLD1Q8NE28 680 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 PPP1R14CQ8TAE6 165 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 SLC35F5Q8WV83 523 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 FAM161BQ96MY7 647 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 RILPQ96NA2 401 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 B3GNT5Q9BYG0 378 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 ZNF395Q9H8N7 513 aaPredicted RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 ELP3Q9H9T3 547 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 MAGEC1O60732 1142 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 LGALS2P05162 132 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 KLC1Q07866 573 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 STX3Q13277 289 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 THOC5Q13769 683 aaKnown RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 HSF5Q4G112 596 aaPredicted RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 MDH1BQ5I0G3 518 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 KCNT2Q6UVM3 1135 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 LRRC74BQ6ZQY2 392 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 TREML1Q86YW5 311 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 CCDC33Q8N5R6 958 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 DTX3LQ8TDB6 740 aa19.35■□□□□ 0.69
CPSF3-201ENST00000238112 QKIQ96PU8 341 aaKnown RBP eCLIP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 LBHD1Q9BQE6 289 aaPredicted RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 STX18Q9P2W9 335 aaKnown RBP19.35■□□□□ 0.69
CPSF3-201ENST00000238112 TAGLN3Q9UI15 199 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms