RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 EBF2Q9HAK2 575 aa9.48□□□□□ -0.89
SYDE2-201ENST00000234668 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.48□□□□□ -0.89
SYDE2-201ENST00000234668 PAK5Q9P286 719 aa9.48□□□□□ -0.89
SYDE2-201ENST00000234668 AP4E1Q9UPM8 1137 aa9.48□□□□□ -0.89
SYDE2-201ENST00000234668 TIMM13Q9Y5L4 95 aaPredicted RBP9.48□□□□□ -0.89
SYDE2-201ENST00000234668 A6NJR5 290 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 KCNK1O00180 336 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 C2CD2LO14523 706 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 PEX11AO75192 247 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 BEST1O76090 585 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 RECQL4O94761 1208 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 SNAI1O95863 264 aaPredicted RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 C1QAP02745 245 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ENO1P06733 434 aaKnown RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ALADP13716 330 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ATICP31939 592 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 AP1B1Q10567 949 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 PPP2R5DQ14738 602 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 HSF5Q4G112 596 aaPredicted RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 BOLA3Q53S33 107 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 DCAF6Q58WW2 860 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 PPM1JQ5JR12 505 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 MAGEC3Q8TD91 643 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 TMEM40Q8WWA1 233 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 APOPT1Q96IL0 206 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 KLC2Q9H0B6 622 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 VPS11Q9H270 941 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 LRMDAQ9H2I8 198 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ZNF358Q9NW07 568 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 PPARGC1AQ9UBK2 798 aaKnown RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 LTBP3Q9NS15 1303 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 CXCL11O14625 94 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 RFPL1O75677 317 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 HAUS5O94927 633 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 PDHA1P08559 390 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 SNRPAP09012 282 aaKnown RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 DLDP09622 509 aaKnown RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 VAV1P15498 845 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 GNL1P36915 607 aaPredicted RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 SLC26A2P50443 739 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 NEK3P51956 506 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ALDH18A1P54886 795 aaKnown RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 INCA1Q0VD86 236 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 HIC1Q14526 733 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 FAM47CQ5HY64 1035 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 RGS9BPQ6ZS82 235 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ZNF534Q76KX8 674 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 NUDCD3Q8IVD9 361 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 NME8Q8N427 588 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 DNAJB3Q8WWF6 145 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 AZIN2Q96A70 460 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 RAB3IPQ96QF0 476 aaPredicted RBP9.47□□□□□ -0.89
SYDE2-201ENST00000234668 EBF4Q9BQW3 602 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 MTMR10Q9NXD2 777 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 ITGA11Q9UKX5 1188 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 PSAT1Q9Y617 370 aa9.47□□□□□ -0.89
SYDE2-201ENST00000234668 FCHO1O14526 889 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 TM9SF1O15321 606 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 GYG2O15488 501 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 TKTP29401 623 aaKnown RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 MLH1P40692 756 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 AFF1P51825 1210 aaKnown RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 SOX4Q06945 474 aaPredicted RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 KPNB1Q14974 876 aaKnown RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 PRKD1Q15139 912 aaPredicted RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 TAF11Q15544 211 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 EML3Q32P44 896 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 SLC45A4Q5BKX6 768 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 TTC39BQ5VTQ0 682 aaPredicted RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 TREML1Q86YW5 311 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 EXOC8Q8IYI6 725 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 DEFB106AQ8N104 65 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 VPS52Q8N1B4 723 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 WDR60Q8WVS4 1066 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 RSRC1Q96IZ7 334 aaKnown RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 SIGLEC10Q96LC7 697 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 RILPQ96NA2 401 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 CSPG4P5Q96PW8 444 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 APOL2Q9BQE5 337 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 SGIP1Q9BQI5 828 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 DTLQ9NZJ0 730 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 PIN4Q9Y237 131 aaKnown RBP9.46□□□□□ -0.89
SYDE2-201ENST00000234668 SNX10Q9Y5X0 201 aa9.46□□□□□ -0.89
SYDE2-201ENST00000234668 ASB14A6NK59 587 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 MEIS3P2A8K0S8 358 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 GOLGA8TH3BQL2 631 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 CHADO15335 359 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 KRT36O76013 467 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 APOEP02649 317 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 AMHP03971 560 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 ESRRAP11474 423 aaPredicted RBP9.46□□□□□ -0.9
SYDE2-201ENST00000234668 MGAT1P26572 445 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 NUMBP49757 651 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 RPL10AP62906 217 aaKnown RBP9.46□□□□□ -0.9
SYDE2-201ENST00000234668 CCDC15Q0P6D6 951 aa9.46□□□□□ -0.9
SYDE2-201ENST00000234668 PKDCCQ504Y2 493 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms