RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 HPS6Q86YV9 775 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 METTL25Q8N6Q8 603 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 RNF148Q8N7C7 305 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 SLC35B2Q8TB61 432 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 PPP1R14BQ96C90 147 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 CCT7Q99832 543 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 DRC3Q9H069 523 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 FAIMQ9NVQ4 179 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 FBXO40Q9UH90 709 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 PCDHGB4Q9UN71 923 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 DMTF1Q9Y222 760 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 PCDHGB5Q9Y5G0 923 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 NR2E3Q9Y5X4 410 aa14.64□□□□□ -0.07
PCDHB3-201ENST00000231130 OCM2P0CE71 109 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 OCMP0CE72 109 aaPredicted RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 EMP3P54852 163 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 PSMC1P62191 440 aaKnown RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 TFAMQ00059 246 aaKnown RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 C1QBPQ07021 282 aaKnown RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 STX3Q13277 289 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 GK3PQ14409 553 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 KRT72Q14CN4 511 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 PDK1Q15118 436 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 ANKDD1AQ495B1 522 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 RAB6CQ53S08 254 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 THOC7Q6I9Y2 204 aaKnown RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 LPCAT2Q7L5N7 544 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 TMEM35BQ8NCS4 154 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 RAB6CQ9H0N0 254 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 MAN1C1Q9NR34 630 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 MAGED2Q9UNF1 606 aaPredicted RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 DNAJC16Q9Y2G8 782 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 KCNN4O15554 427 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 C4BPAP04003 597 aaKnown RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 RAP1GAPP47736 663 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 TLR1Q15399 786 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 ATG16L1Q676U5 607 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 PHF13Q86YI8 300 aaPredicted RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 UNC5BQ8IZJ1 945 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 NKD2Q969F2 451 aaPredicted RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 GFM2Q969S9 779 aaKnown RBP14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 ATXN7L3BQ96GX2 97 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 TMX2Q9Y320 296 aa14.63□□□□□ -0.07
PCDHB3-201ENST00000231130 K7ERI5 159 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 MAGEC1O60732 1142 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 RAP1GDS1P52306 607 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 CDH6P55285 790 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 MYL6P60660 151 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 PHEXP78562 749 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 RELAQ04206 551 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TMEM132AQ24JP5 1023 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 SH3PXD2AQ5TCZ1 1133 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TRMT10BQ6PF06 316 aaKnown RBP14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 KIAA0319LQ8IZA0 1049 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 DEFB107AQ8IZN7 70 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 NETO2Q8NC67 525 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 PPP4R1Q8TF05 950 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 SLC44A1Q8WWI5 657 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 ZNF341Q9BYN7 854 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 MTMR12Q9C0I1 747 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 SNRPAP09012 282 aaKnown RBP14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 CRADDP78560 199 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 HADHQ16836 314 aaKnown RBP14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 C14orf80Q86SX3 495 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 C4orf19Q8IY42 314 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TFAP2BQ92481 460 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TBC1D23Q9NUY8 699 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 SOX13Q9UN79 622 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 ZNF536O15090 1300 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 BUD23O43709 281 aaKnown RBP14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 ITM2AO43736 263 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 EXTL3O43909 919 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 LRCH4O75427 683 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 CALB1P05937 261 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TNFSF9P41273 254 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TRIM72Q6ZMU5 477 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TAS1R3Q7RTX0 852 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TMC7Q7Z402 723 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 SLC26A11Q86WA9 606 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 LRGUKQ96M69 825 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 IDI2Q9BXS1 227 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 TMEM39BQ9GZU3 492 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 KCNK4Q9NYG8 393 aa14.62□□□□□ -0.07
PCDHB3-201ENST00000231130 MYO18AQ92614 2054 aaKnown RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 CFLARO15519 480 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 KDELR1P24390 212 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 FDFT1P37268 417 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 TTC39BQ5VTQ0 682 aaPredicted RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 SLC2A7Q6PXP3 512 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 FASTKD5Q7L8L6 764 aaKnown RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 IFNLR1Q8IU57 520 aaPredicted RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 THAP11Q96EK4 314 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 CAAP1Q9H8G2 361 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 TBC1D22BQ9NU19 505 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 COQ6Q9Y2Z9 468 aa14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 KPNA1P52294 538 aaPredicted RBP14.61□□□□□ -0.07
PCDHB3-201ENST00000231130 CDH8P55286 799 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms