RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 PTP4A2Q12974 167 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-201ENST00000230480 C2CD6Q53TS8 623 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 TAF3Q5VWG9 929 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 CC2D1AQ6P1N0 951 aaPredicted RBP14.36□□□□□ -0.11
VEGFA-201ENST00000230480 OLFML1Q6UWY5 402 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 ATP2A3Q93084 1043 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 SLC39A13Q96H72 371 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
VEGFA-201ENST00000230480 ABCC13Q9NSE7 274 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 RASAL2Q9UJF2 1139 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 STOML2Q9UJZ1 356 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 FBXO10Q9UK96 956 aa14.36□□□□□ -0.11
VEGFA-201ENST00000230480 SLC12A8A0AV02 714 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 I6L893 689 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-201ENST00000230480 AP5Z1O43299 807 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 MED7O43513 233 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 FBXO21O94952 628 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 HMBSP08397 361 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 RALAP11233 206 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 TFE3P19532 575 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-201ENST00000230480 GABRB2P47870 512 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 NOMO3P69849 1222 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 NHLH1Q02575 133 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 FKBP15Q5T1M5 1219 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 BTBD8Q5XKL5 378 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 FAM183BPQ6ZVS7 135 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 BEND5Q7L4P6 421 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 DDX42Q86XP3 938 aaKnown RBP eCLIP14.35□□□□□ -0.115e-7■■■■□ 19.9
VEGFA-201ENST00000230480 FMNL3Q8IVF7 1028 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 SIX6OS1Q8N1H7 587 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 ARHGAP18Q8N392 663 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 DQX1Q8TE96 717 aaKnown RBP14.35□□□□□ -0.11
VEGFA-201ENST00000230480 MSANTD3Q96H12 275 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 PPP1R13BQ96KQ4 1090 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 FCRL2Q96LA5 508 aaPredicted RBP14.35□□□□□ -0.11
VEGFA-201ENST00000230480 SLC2A13Q96QE2 648 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 SPHK2Q9NRA0 654 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 MARK1Q9P0L2 795 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 FAM186AA6NE01 2351 aa14.35□□□□□ -0.11
VEGFA-201ENST00000230480 A0A1W2PQC6 194 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 K7ESF4 209 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 HOXC11O43248 304 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-201ENST00000230480 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-201ENST00000230480 HNRNPLP14866 589 aaKnown RBP eCLIP14.34□□□□□ -0.11
VEGFA-201ENST00000230480 PTMSP20962 102 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 ACADSBP45954 432 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 PTPN5P54829 565 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 SLC8A3P57103 927 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 DMWDQ09019 674 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 ANGPT1Q15389 498 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 EMC10Q5UCC4 262 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 FYB2Q5VWT5 728 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 RNF43Q68DV7 783 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 NADSYN1Q6IA69 706 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 TSSK4Q6SA08 328 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 TAC4Q86UU9 113 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 C1orf210Q8IVY1 113 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 CPA6Q8N4T0 437 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 OTUB2Q96DC9 234 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 P2RY13Q9BPV8 354 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 ANLNQ9NQW6 1124 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 PRMT8Q9NR22 394 aaPredicted RBP14.34□□□□□ -0.11
VEGFA-201ENST00000230480 ST7Q9NRC1 585 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 TBC1D14Q9P2M4 693 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 XPO7Q9UIA9 1087 aaKnown RBP14.34□□□□□ -0.11
VEGFA-201ENST00000230480 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 GVINP1Q7Z2Y8 2422 aa14.34□□□□□ -0.11
VEGFA-201ENST00000230480 PTPRZ1P23471 2315 aaPredicted RBP14.33□□□□□ -0.11
VEGFA-201ENST00000230480 GOLGA6L7A0A1B0GV03 622 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 TCRBV5S1A1TA0A578 114 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 SLC9A3R1O14745 358 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-201ENST00000230480 NFATC1O95644 943 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 PENKP01210 267 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-201ENST00000230480 SP9P0CG40 484 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 CORO1AP31146 461 aaKnown RBP14.33□□□□□ -0.12
VEGFA-201ENST00000230480 SLC6A4P31645 630 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 SGSHP51688 502 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 BPIFB4P59827 614 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 COG7P83436 770 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 SATB1Q01826 763 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 CDR2Q01850 454 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 RAB6CQ53S08 254 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 FAM133BQ5BKY9 247 aaKnown RBP14.33□□□□□ -0.12
VEGFA-201ENST00000230480 BNIPLQ7Z465 357 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 XYLT1Q86Y38 959 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 DEFB106AQ8N104 65 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 NEK11Q8NG66 645 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 ADAM32Q8TC27 787 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 CPA5Q8WXQ8 436 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 CD101Q93033 1021 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 NT5C3BQ969T7 300 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 RAB6CQ9H0N0 254 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 IRF2BPLQ9H1B7 796 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 TMEM59LQ9UK28 342 aa14.33□□□□□ -0.12
VEGFA-201ENST00000230480 MRPS17Q9Y2R5 130 aaKnown RBP14.33□□□□□ -0.12
VEGFA-201ENST00000230480 HBS1LQ9Y450 684 aaKnown RBP14.33□□□□□ -0.12
VEGFA-201ENST00000230480 ZNF292O60281 2723 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms