RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 AQP4P55087 323 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 PDK3Q15120 406 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 SLC44A4Q53GD3 710 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 DARS2Q6PI48 645 aaKnown RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 HSPH1Q92598 858 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 FDXACB1Q9BRP7 624 aaPredicted RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 TAGLN3Q9UI15 199 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 SLC24A2Q9UI40 661 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 TDRKHQ9Y2W6 561 aaKnown RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 SYNJ2BP-COX16A0A087WUM0 186 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 PEX1O43933 1283 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 CST8O60676 142 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 CABYRO75952 493 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 KRT37O76014 449 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 TCN1P20061 433 aaPredicted RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 BMT2Q1RMZ1 405 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 CLEC16AQ2KHT3 1053 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 DCAF4L1Q3SXM0 396 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 ANO5Q75V66 913 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 CD101Q93033 1021 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 COX16Q9P0S2 106 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 CAPN8A6NHC0 703 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 PEX10O60683 326 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 RAG1P15918 1043 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 GNA15P30679 374 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 NRLP54845 237 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 JAG1P78504 1218 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 BST1Q10588 318 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 C12orf50Q8NA57 414 aaPredicted RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 DENND1AQ8TEH3 1009 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 TRAPPC12Q8WVT3 735 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 OSMRQ99650 979 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 SIKE1Q9BRV8 207 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 RBPJLQ9UBG7 517 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 NOCTQ9UK39 431 aaKnown RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 RPL26L1Q9UNX3 145 aaKnown RBP11.9□□□□□ -0.5
CCND1-201ENST00000227507 DTNAQ9Y4J8 743 aa11.9□□□□□ -0.5
CCND1-201ENST00000227507 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 PGK1P00558 417 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 CD4P01730 458 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 SPATA31D3P0C874 917 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 DLG1Q12959 904 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 SPATA31D4Q6ZUB0 917 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 ABRAQ8N0Z2 381 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 NDUFAF2Q8N183 169 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 FAF2Q96CS3 445 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 PANX3Q96QZ0 392 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 MRPL1Q9BYD6 325 aaKnown RBP11.9□□□□□ -0.51
CCND1-201ENST00000227507 SUN2Q9UH99 717 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 ATP11BQ9Y2G3 1177 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 NUMBLQ9Y6R0 609 aa11.9□□□□□ -0.51
CCND1-201ENST00000227507 DGKIO75912 1065 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ADRB2P07550 413 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 VCLP18206 1134 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 NELFEP18615 380 aaKnown RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 SOX10P56693 466 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 RPL7AP62424 266 aaKnown RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 RALGPS1Q5JS13 557 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 SV2AQ7L0J3 742 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ZC3H3Q8IXZ2 948 aaKnown RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 DEFB107AQ8IZN7 70 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ACTL9Q8TC94 416 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 PPP4R1Q8TF05 950 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 SRPK1Q96SB4 655 aaKnown RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 VPS11Q9H270 941 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 TMCO1Q9UM00 188 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ITM2BQ9Y287 266 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 MYOCOSA0A1B0GUC4 107 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 F8VP50 259 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 AIM2O14862 343 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ITGA2BP08514 1039 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 PMLP29590 882 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ELK3P41970 407 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 STX3Q13277 289 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 NXNQ6DKJ4 435 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 ZBTB46Q86UZ6 589 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 TREML1Q86YW5 311 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 ALKBH8Q96BT7 664 aaKnown RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 SNX9Q9Y5X1 595 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 TCEA3O75764 348 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 NAT2P11245 290 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 GARTP22102 1010 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 PPP2R5DQ14738 602 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 MORF4L2Q15014 288 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
CCND1-201ENST00000227507 ANKRD22Q5VYY1 191 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 FAM117BQ6P1L5 589 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 DHDDSQ86SQ9 333 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 DNAJB3Q8WWF6 145 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 CLEC4DQ8WXI8 215 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 CENPOQ9BU64 300 aa11.89□□□□□ -0.51
CCND1-201ENST00000227507 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms