RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 C2orf78A6NCI8 922 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 SPDYE4A6NLX3 237 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 FANCGO15287 622 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 COCHO43405 550 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 TUBB4AP04350 444 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.07
SEC61B-201ENST00000223641 RDXP35241 583 aaKnown RBP14.63□□□□□ -0.07
SEC61B-201ENST00000223641 CXCR3P49682 368 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 GNG11P61952 73 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 NTHL1P78549 312 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 SLC25A11Q02978 314 aaKnown RBP14.63□□□□□ -0.07
SEC61B-201ENST00000223641 CDO1Q16878 200 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 CYP4V2Q6ZWL3 525 aaPredicted RBP14.63□□□□□ -0.07
SEC61B-201ENST00000223641 MYLIPQ8WY64 445 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 HES6Q96HZ4 224 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 SERPINB11Q96P15 392 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 GCNAQ96QF7 691 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 WDR24Q96S15 920 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 ATXN3LQ9H3M9 355 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 PIDD1Q9HB75 910 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 PIGVQ9NUD9 493 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 MTMR10Q9NXD2 777 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 CLDND1Q9NY35 253 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 SFMBT1Q9UHJ3 866 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 TLR6Q9Y2C9 796 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 JRKLQ9Y4A0 524 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 DENND4AQ7Z401 1863 aa14.63□□□□□ -0.07
SEC61B-201ENST00000223641 HELZP42694 1942 aaKnown RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TMEM110-MUSTN1A8MSY1 372 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 IGLV3-27P01718 113 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TCF4P15884 667 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 GJA1P17302 382 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 DESP17661 470 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 IL1R2P27930 398 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 MIPP30301 263 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 GBP1P32455 592 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 ATXN1P54253 815 aaKnown RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TAS2R40P59535 323 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 SLC7A9P82251 487 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 CYP4F8P98187 520 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 DEUP1Q05D60 604 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 RING1Q06587 406 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 EFEMP1Q12805 493 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TRIP4Q15650 581 aaPredicted RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 C10orf120Q5SQS8 335 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 DAB2IPQ5VWQ8 1189 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TXNDC8Q6A555 127 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 POTEHQ6S545 545 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 RSRC2Q7L4I2 434 aaKnown RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 PEX26Q7Z412 305 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 POLNQ7Z5Q5 900 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 ADAM32Q8TC27 787 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 ZFRQ96KR1 1074 aaKnown RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 SLC22A12Q96S37 553 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TLR10Q9BXR5 811 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 SLC46A2Q9BY10 475 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 TASP1Q9H6P5 420 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 SPTBN5Q9NRC6 3674 aaKnown RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 DDIT4Q9NX09 232 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 MARCH2Q9P0N8 246 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 DNMT3LQ9UJW3 386 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 AMFRQ9UKV5 643 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 USP18Q9UMW8 372 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 HBS1LQ9Y450 684 aaKnown RBP14.62□□□□□ -0.07
SEC61B-201ENST00000223641 HYOU1Q9Y4L1 999 aa14.62□□□□□ -0.07
SEC61B-201ENST00000223641 NUP210Q8TEM1 1887 aaPredicted RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 MIF4GDA9UHW6 222 aaKnown RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 MDM4O15151 490 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 FTCDO95954 541 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 CTNNA2P26232 953 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 WEE1P30291 646 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 CTNNA1P35221 906 aaKnown RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 PEX5P50542 639 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 KPNA1P52294 538 aaPredicted RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 AIF1P55008 147 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 PPP2R5DQ14738 602 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 TEAD2Q15562 447 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 STXBP5Q5T5C0 1151 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 DEFB123Q8N688 67 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 NTAN1Q96AB6 310 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 FCRL2Q96LA5 508 aaPredicted RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 C16orf45Q96MC5 204 aaPredicted RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 PEBP4Q96S96 227 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 KLF16Q9BXK1 252 aaPredicted RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 ARHGEF38Q9NXL2 777 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 USTQ9Y2C2 406 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 MRPS23Q9Y3D9 190 aaKnown RBP14.61□□□□□ -0.07
SEC61B-201ENST00000223641 PCDHA3Q9Y5H8 950 aa14.61□□□□□ -0.07
SEC61B-201ENST00000223641 CCDC66A2RUB6 948 aa14.6□□□□□ -0.07
SEC61B-201ENST00000223641 KCNU1A8MYU2 1149 aa14.6□□□□□ -0.07
SEC61B-201ENST00000223641 I6L893 689 aaPredicted RBP14.6□□□□□ -0.07
SEC61B-201ENST00000223641 KIF2AO00139 706 aaPredicted RBP14.6□□□□□ -0.07
SEC61B-201ENST00000223641 DDX3YO15523 660 aaKnown RBP14.6□□□□□ -0.07
SEC61B-201ENST00000223641 MSI1O43347 362 aaKnown RBP14.6□□□□□ -0.07
SEC61B-201ENST00000223641 PSTPIP1O43586 416 aa14.6□□□□□ -0.07
SEC61B-201ENST00000223641 SPOPO43791 374 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms