RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 RAD9BQ6WBX8 426 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 YAF2Q8IY57 180 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 SH3RF2Q8TEC5 729 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 KHSRPQ92945 711 aaKnown RBP eCLIP21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 PLD4Q96BZ4 506 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 DDX23Q9BUQ8 820 aaKnown RBP21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 DDIT4Q9NX09 232 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 CTTNBP2NLQ9P2B4 639 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 UVRAGQ9P2Y5 699 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 SFMBT1Q9UHJ3 866 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 LCMT1Q9UIC8 334 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 PCDHA13Q9Y5I0 950 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 TCRBV5S1A1TA0A578 114 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 LEFTY2O00292 366 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 F9P00740 461 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 RFC1P35251 1148 aaPredicted RBP21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 HTR4Q13639 388 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 MTF1Q14872 753 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 PPP1R15BQ5SWA1 713 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 TAC4Q86UU9 113 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 EMC1Q8N766 993 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 KIAA1958Q8N8K9 716 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 BPIFB1Q8TDL5 484 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 RXFP2Q8WXD0 754 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 NUP85Q9BW27 656 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 KLF16Q9BXK1 252 aaPredicted RBP21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 DCLK3Q9C098 648 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 CCL26Q9Y258 94 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 TLR6Q9Y2C9 796 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 NUMBLQ9Y6R0 609 aa21.05■□□□□ 0.96
RHBDD3-201ENST00000216085 C2CD4BA6NLJ0 364 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 HEPACAM2A8MVW5 462 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 ANHXE9PGG2 379 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 M0QYT0 321 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 ZNF263O14978 683 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 IRF1P10914 325 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 VIPR2P41587 438 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 PTPN9P43378 593 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 HARS2P49590 506 aaKnown RBP21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 TBX4P57082 545 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 USP4Q13107 963 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 TRIP4Q15650 581 aaPredicted RBP21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 NUGGCQ68CJ6 796 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 PARM1Q6UWI2 310 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 KIAA1328Q86T90 577 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 UNC45BQ8IWX7 931 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 RHOT2Q8IXI1 618 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 JOSD2Q8TAC2 188 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 FGF14Q92915 247 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 KXD1Q9BQD3 176 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 PACSIN1Q9BY11 444 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 CFAP97Q9P2B7 532 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 LIMD1Q9UGP4 676 aa21.04■□□□□ 0.96
RHBDD3-201ENST00000216085 IRAK2O43187 625 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 SLC2A3P11169 496 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 PSMC3P17980 439 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 FCARP24071 287 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 ZNF143P52747 638 aaPredicted RBP21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 RING1Q06587 406 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 MTA1Q13330 715 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 TANGO2Q6ICL3 276 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 POTEHQ6S545 545 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 ADAM32Q8TC27 787 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 FNIP1Q8TF40 1166 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 RNF34Q969K3 372 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 ZFRQ96KR1 1074 aaKnown RBP21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 CFAP57Q96MR6 1250 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 NPY6RQ99463 290 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 ZNF510Q9Y2H8 683 aa21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 HELZP42694 1942 aaKnown RBP21.03■□□□□ 0.96
RHBDD3-201ENST00000216085 SLC9A3R1O14745 358 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 MSI1O43347 362 aaKnown RBP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 GJB6O95452 261 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 APOEP02649 317 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 RPL7AP62424 266 aaKnown RBP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 DEUP1Q05D60 604 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 NME3Q13232 169 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 ZNF77Q15935 545 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 MFSD6LQ8IWD5 586 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 ZNF564Q8TBZ8 553 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 RFFLQ8WZ73 363 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 NT5C3BQ969T7 300 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 CNPY3Q9BT09 278 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 KCNK12Q9HB15 430 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 SLC12A6Q9UHW9 1150 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 SYNJ2BP-COX16A0A087WUM0 186 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 E2F8A0AVK6 867 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 HMBSP08397 361 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 PSMA2P25787 234 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 CCR1P32246 355 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 RDXP35241 583 aaKnown RBP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 STRADAQ7RTN6 431 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 ARHGEF26Q96DR7 871 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 PGAP3Q96FM1 320 aaPredicted RBP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 PPP1R9BQ96SB3 815 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 NCAPGQ9BPX3 1015 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 GKN1Q9NS71 199 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 COX16Q9P0S2 106 aa21.02■□□□□ 0.96
RHBDD3-201ENST00000216085 TBC1D14Q9P2M4 693 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms