RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 TCN1P20061 433 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 BGNP21810 368 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 NR1H3Q13133 447 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 CCDC117Q8IWD4 279 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 CLEC4CQ8WTT0 213 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 USP6NLQ92738 828 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 PAAF1Q9BRP4 392 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 THTPAQ9BU02 230 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 YIPF3Q9GZM5 350 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 WHRNQ9P202 907 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 HEY2Q9UBP5 337 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 MAP1BP46821 2468 aaKnown RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 HMGCRP04035 888 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SLC10A3P09131 477 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 GATMP50440 423 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 VCPP55072 806 aaKnown RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 GEMIN4P57678 1058 aaKnown RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 RTP1P59025 263 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 NOMO3P69849 1222 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 CTXN3Q4LDR2 81 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SLC39A12Q504Y0 691 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 PMLP29590 882 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 AVPR1AP37288 418 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 ETFBP38117 255 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 COPS2P61201 443 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 CDC42EP1Q00587 391 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 RGS9BPQ6ZS82 235 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SYDE1Q6ZW31 735 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 MTDHQ86UE4 582 aaKnown RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SLC26A7Q8TE54 656 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SGSM3Q96HU1 749 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 KCNK16Q96T55 309 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 PLEKHA5Q9HAU0 1116 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 USH1CQ9Y6N9 552 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SSC5DA1L4H1 1573 aa12.48□□□□□ -0.41
CHPF2-201ENST00000035307 SPECC1L-ADORA2AF8WAN1 911 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 PRRG1O14668 218 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 TRAPPC3O43617 180 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ATG7O95352 703 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 RBL1P28749 1068 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 NDUFV1P49821 464 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ACLYP53396 1101 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 JAM2P57087 298 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 DDR2Q16832 855 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ISLR2Q6UXK2 745 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ZNF662Q6ZS27 426 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ULBP1Q9BZM6 244 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 NOD2Q9HC29 1040 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 RPS6KL1Q9Y6S9 549 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 EEF2KO00418 725 aaKnown RBP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 PGM1P36871 562 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 POLE2P56282 527 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 OCRLQ01968 901 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ZC3H12AQ5D1E8 599 aaKnown RBP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 C17orf99Q6UX52 265 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 DEFB106AQ8N104 65 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 TCP10LQ8TDR4 215 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 VCX3BQ9H321 246 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 B2RBV5 119 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 SPTLC1O15269 473 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 STBD1O95210 358 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 LCA5LO95447 670 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 NSUN2Q08J23 767 aaKnown RBP eCLIP12.47□□□□□ -0.41
CHPF2-201ENST00000035307 DCAF12L1Q5VU92 463 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ATAD1Q8NBU5 361 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 KAT2BQ92831 832 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ATP6V1E2Q96A05 226 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 SLC38A7Q9NVC3 462 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 SRRDQ9UH36 339 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 ITGA11Q9UKX5 1188 aa12.47□□□□□ -0.41
CHPF2-201ENST00000035307 UBA6A0AVT1 1052 aaPredicted RBP12.46□□□□□ -0.41
CHPF2-201ENST00000035307 YWHAHQ04917 246 aaPredicted RBP12.46□□□□□ -0.41
CHPF2-201ENST00000035307 EFEMP1Q12805 493 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 FAM183BPQ6ZVS7 135 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 NLRP9Q7RTR0 991 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 OSBPL1AQ9BXW6 950 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 UNC93B1Q9H1C4 597 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 AP4E1Q9UPM8 1137 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 CD48P09326 243 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 SP100P23497 879 aaPredicted RBP12.46□□□□□ -0.41
CHPF2-201ENST00000035307 ART3Q13508 389 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 CUL3Q13618 768 aa12.46□□□□□ -0.41
CHPF2-201ENST00000035307 TXNRD3NBQ6F5E7 133 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms