RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 DCLK3Q9C098 648 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 TMEM74BQ9NUR3 256 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 BCCIPQ9P287 314 aaKnown RBP eCLIP16.68■□□□□ 0.26
ERCC1-201ENST00000013807 NUDT5Q9UKK9 219 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 FRYQ5TBA9 3013 aa16.68■□□□□ 0.26
ERCC1-201ENST00000013807 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 PATE3B3GLJ2 98 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 NPC1O15118 1278 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 MDM4O15151 490 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 PMM2O15305 246 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 MAP3K13O43283 966 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 AP5Z1O43299 807 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 ZNF217O75362 1048 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 CEACAM1P13688 526 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 ZNF394Q53GI3 561 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 FYB2Q5VWT5 728 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 SDE2Q6IQ49 451 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 TOGARAM2Q6ZUX3 1019 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 METTL3Q86U44 580 aaKnown RBP16.67■□□□□ 0.26
ERCC1-201ENST00000013807 PIGZQ86VD9 579 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 TTC30AQ86WT1 665 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 SMYD4Q8IYR2 804 aaPredicted RBP16.67■□□□□ 0.26
ERCC1-201ENST00000013807 TMEFF1Q8IYR6 380 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 CPXM2Q8N436 756 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 IPO4Q8TEX9 1081 aaKnown RBP16.67■□□□□ 0.26
ERCC1-201ENST00000013807 TATDN2Q93075 761 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 JAKMIP2Q96AA8 810 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 ACOX2Q99424 681 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 MMRN2Q9H8L6 949 aa16.67■□□□□ 0.26
ERCC1-201ENST00000013807 UPK3BL1B0FP48 263 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 UPK3BL2E5RIL1 263 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 C7P10643 843 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 PNOCQ13519 176 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 TRIM61Q5EBN2 209 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 LYSMD4Q5XG99 296 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 BHLHA9Q7RTU4 235 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 ELOA2Q8IYF1 753 aaPredicted RBP16.66■□□□□ 0.26
ERCC1-201ENST00000013807 CHPFQ8IZ52 775 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 PGBD3Q8N328 593 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 KNL1Q8NG31 2342 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 CEP76Q8TAP6 659 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 EEF2KMTQ96G04 330 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 ARID3AQ99856 593 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 GDPD2Q9HCC8 539 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 CALCOCO1Q9P1Z2 691 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 WASF3Q9UPY6 502 aa16.66■□□□□ 0.26
ERCC1-201ENST00000013807 IGHV1OR15-9A0A0B4J2B8 117 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 MFAP3P55082 362 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 SLC8A3P57103 927 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 E2F5Q15329 346 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 ANKRD40Q6AI12 368 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 PSAPL1Q6NUJ1 521 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 RABEPKQ7Z6M1 372 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 SCML4Q8N228 414 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 UBR7Q8N806 425 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 RBBP8NLQ8NC74 664 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-201ENST00000013807 SLC35C1Q96A29 364 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 ZNF419Q96HQ0 510 aaPredicted RBP16.65■□□□□ 0.26
ERCC1-201ENST00000013807 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
ERCC1-201ENST00000013807 MRGPRX1Q96LB2 322 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 TIGD1Q96MW7 591 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 NUSAP1Q9BXS6 441 aaKnown RBP16.65■□□□□ 0.26
ERCC1-201ENST00000013807 SLC2A11Q9BYW1 496 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
ERCC1-201ENST00000013807 KIAA1257Q9ULG3 409 aa16.65■□□□□ 0.26
ERCC1-201ENST00000013807 XPO1O14980 1071 aaKnown RBP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 ZBTB24O43167 697 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 ZBED1O96006 694 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 NDUFV2P19404 249 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 ITPKAP23677 461 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 CORO1AP31146 461 aaKnown RBP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 TKTL1P51854 596 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 PMS1P54277 932 aaKnown RBP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 YWHAGP61981 247 aaKnown RBP eCLIP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 ZNF33AQ06730 810 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 CUL2Q13617 745 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 TRIP4Q15650 581 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 DUOXA1Q1HG43 343 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 PKDCCQ504Y2 493 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 SH3PXD2AQ5TCZ1 1133 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 FOXR2Q6PJQ5 311 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 KCTD13Q8WZ19 329 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 CAPN10Q9HC96 672 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 MARCH2Q9P0N8 246 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 THAP10Q9P2Z0 257 aaPredicted RBP16.64■□□□□ 0.25
ERCC1-201ENST00000013807 STOML2Q9UJZ1 356 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 STRIP2Q9ULQ0 834 aa16.64■□□□□ 0.25
ERCC1-201ENST00000013807 CFAP47Q6ZTR5 3102 aa16.63■□□□□ 0.25
ERCC1-201ENST00000013807 GIPC1O14908 333 aa16.63■□□□□ 0.25
ERCC1-201ENST00000013807 SERPINF2P08697 491 aa16.63■□□□□ 0.25
ERCC1-201ENST00000013807 ENGP17813 658 aa16.63■□□□□ 0.25
ERCC1-201ENST00000013807 WASP42768 502 aa16.63■□□□□ 0.25
ERCC1-201ENST00000013807 NOVA1P51513 510 aaKnown RBP16.63■□□□□ 0.25
ERCC1-201ENST00000013807 BCAT1P54687 386 aa16.63■□□□□ 0.25
ERCC1-201ENST00000013807 YWHAEP62258 255 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms