RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.41
TSPAN9-201ENST00000011898 NEMP1O14524 444 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 ITGB3P05106 788 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PDGFRBP09619 1106 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 COPAP53621 1224 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 MAP3K10Q02779 954 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 RASA2Q15283 850 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 EFCAB12Q6NXP0 572 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 ERO1BQ86YB8 467 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 RAET1EQ8TD07 263 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SEPT8Q92599 483 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 DNAJC1Q96KC8 554 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PCYOX1Q9UHG3 505 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 ZMYND8Q9ULU4 1186 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SBF1O95248 1867 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 GJB6O95452 261 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 BCL10O95999 233 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 ITGB5P18084 799 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 GPD1P21695 349 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 BACE1P56817 501 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 AUHQ13825 339 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SPDYCQ5MJ68 293 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 MFSD7Q6UXD7 560 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CDH24Q86UP0 819 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 HORMAD1Q86X24 394 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 MAP4K3Q8IVH8 894 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SPIRE2Q8WWL2 714 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 E2F7Q96AV8 911 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CMTM5Q96DZ9 223 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 MCRS1Q96EZ8 462 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CGRRF1Q99675 332 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 TRNAU1APQ9NX07 287 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CTNNAL1Q9UBT7 734 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 M0R2N6 131 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 IL10P22301 178 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PMLP29590 882 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PPARGP37231 505 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CLK1P49759 484 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 GSTA3Q16772 222 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 RGS21Q2M5E4 152 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 BOLA3Q53S33 107 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CHADLQ6NUI6 762 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 RNF139Q8WU17 664 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PYDC1Q8WXC3 89 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SHC3Q92529 594 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 DGCR14Q96DF8 476 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 HPDLQ96IR7 371 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PAFAH2Q99487 392 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 ARMCX1Q9P291 453 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 TELO2Q9Y4R8 837 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 FOCADQ5VW36 1801 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 CFAP99D6REC4 459 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PEX1O43933 1283 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 PTPRAP18433 802 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 FKBP1BP68106 108 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 FOXD4Q12950 439 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 STILQ15468 1287 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 NOL9Q5SY16 702 aaKnown RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 ZBTB45Q96K62 511 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 TRIM15Q9C019 465 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 AVENQ9NQS1 362 aaPredicted RBP12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 SPATA7Q9P0W8 599 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 DNPEPQ9ULA0 475 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 WDR37Q9Y2I8 494 aa12.51□□□□□ -0.41
TSPAN9-201ENST00000011898 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 ADRB2P07550 413 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 CCDC166P0CW27 439 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 POU5F1BQ06416 359 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 MRPL28Q13084 256 aaKnown RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 LACTB2Q53H82 288 aaPredicted RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 ZNF618Q5T7W0 954 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 TNPO2O14787 897 aaKnown RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 TSC22D2O75157 780 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 USP2O75604 605 aaPredicted RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 KLHL2O95198 593 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 HSPA13P48723 471 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 NLRP11P59045 1033 aaKnown RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 GTF2BQ00403 316 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 KIF19Q2TAC6 998 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 NIPA1Q7RTP0 329 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 SIK2Q9H0K1 926 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 MRPL40Q9NQ50 206 aaKnown RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 PRMT7Q9NVM4 692 aaPredicted RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 VAV3Q9UKW4 847 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 CDK5RAP2Q96SN8 1893 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 WDR47O94967 919 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 SLC4A1P02730 911 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 NUDT17P0C025 328 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 CCDC130P13994 396 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 SSTR1P30872 391 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms