RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Rag1P15919 1040 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Gdf7P43029 461 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Pkn1P70268 946 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Pdcd1Q02242 288 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Slc2a12Q8BFW9 622 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Phactr3Q8BYK5 558 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Sept8Q8CHH9 429 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Sh2d5Q8JZW5 429 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Thoc1Q8R3N6 657 aaKnown RBP12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Trim60Q8VI40 466 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Twf1Q91YR1 350 aaKnown RBP12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Lpgat1Q91YX5 370 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Rxfp2Q91ZZ5 737 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Bbox1Q924Y0 387 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Dcaf6Q9DC22 876 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Rab13Q9DD03 202 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Tmed2Q9R0Q3 201 aa12.87□□□□□ -0.35
Lig3-202ENSMUST00000080461 Arhgef26D3YYY8 869 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Nrp1P97333 923 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Epas1P97481 874 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Faf2Q3TDN2 445 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Tmem26Q3UP23 366 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Syne3Q4FZC9 975 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Mapre1Q61166 268 aaKnown RBP12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Tmc8Q7TN58 722 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 PisdQ8BSF4 406 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Dnajb4Q9D832 337 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Lactbl1S4R213 581 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 CitP49025 2055 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Cyp2t4E9PWV0 503 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 BC049352E9Q2Z6 85 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 AgxtO35423 414 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Cldn5O54942 218 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Sypl2O89104 264 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Eno1P17182 434 aaKnown RBP12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 FynP39688 537 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 YwhahP68510 246 aaKnown RBP12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Ehbp1Q69ZW3 1231 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Cnot10Q8BH15 744 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Eif2b5Q8CHW4 717 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Dnajc28Q8VCE1 385 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Trem2Q99NH8 227 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 GabrqQ9JLF1 638 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 XkQ9QXY7 446 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Tmem59Q9QY73 323 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 NbnQ9R207 751 aa12.86□□□□□ -0.35
Lig3-202ENSMUST00000080461 Patl2A2ARM1 529 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Ppp1r36D3Z0R2 411 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Oaz2O08608 189 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Lrriq3Q14DL3 633 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Slc38a5Q3U1J0 479 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Pld5Q3UNN8 536 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Itga1Q3V3R4 1179 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Shroom1Q5SX79 823 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Olfr8Q60892 310 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 DazlQ64368 298 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Wdr44Q6NVE8 915 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Smarcal1Q8BJL0 910 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Eif2aQ8BJW6 581 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 PrccQ9EQC8 491 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Mkrn2Q9ERV1 416 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Actn2Q9JI91 894 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 A930018M24RikB7ZMY3 218 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 GsrP47791 500 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Itga11P61622 1188 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Igsf9Q05BQ1 1179 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Mrgprx2Q3UG50 352 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Pik3r5Q5SW28 871 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 SnphQ80U23 495 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 KyQ8C8H8 661 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 KynuQ9CXF0 464 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Homer2Q9QWW1 354 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Veph1A1A535 833 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Akap17bA2A3V1 959 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Tbc1d16A2ABG4 766 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Serpina3iD3Z450 408 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Gm6205E9PZS2 359 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Gm21293E9Q4G9 266 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Calhm3J3QMI4 347 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Gpr25P0C5I1 358 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Ap2a2P17427 938 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 TankP70347 448 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Tmem120bQ3TA38 339 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Fubp3Q3TIX6 575 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 HnrnpdQ60668 355 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Chmp2bQ8BJF9 213 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Znf76Q8BMU0 568 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Pwp2Q8BU03 919 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Rhpn2Q8BWR8 686 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Csnk1g3Q8C4X2 424 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Gm6367Q8C6L9 287 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Ddx1Q91VR5 740 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 TfQ921I1 697 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Npffr2Q924H0 417 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Cpt1bQ924X2 772 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Xpo6Q924Z6 1125 aa12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Cwc15Q9JHS9 229 aaKnown RBP12.85□□□□□ -0.35
Lig3-202ENSMUST00000080461 Rtl9Q32KG4 1339 aa12.84□□□□□ -0.35
Lig3-202ENSMUST00000080461 Ces1bD3Z5G7 567 aa12.84□□□□□ -0.35
Lig3-202ENSMUST00000080461 Pcdh9F8VPK8 1237 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms