RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 FAM172AQ8WUF8 416 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 ZNF707Q96C28 371 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 TBCBQ99426 244 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 ATXN3LQ9H3M9 355 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 CCSER2Q9H7U1 834 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 IL21Q9HBE4 155 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 TRPC7Q9HCX4 862 aa18.25■□□□□ 0.51
PHGDH-230ENST00000641927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 DNMT3BQ9UBC3 853 aaKnown RBP18.25■□□□□ 0.51
PHGDH-230ENST00000641927 PRRC2BQ5JSZ5 2229 aaKnown RBP18.24■□□□□ 0.51
PHGDH-230ENST00000641927 A0A1W2PRU2 124 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 TADA3O75528 432 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 TBX18O95935 607 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 F11P03951 625 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 RHOP08100 348 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 ZDHHC11BP0C7U3 371 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 CDC25CP30307 473 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 PTPN9P43378 593 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 PITX1P78337 314 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-230ENST00000641927 HECTD3Q5T447 861 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 GAREM2Q75VX8 874 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 Q7L0L9 218 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 BEND5Q7L4P6 421 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 TMEM150AQ86TG1 271 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 NIPA2Q8N8Q9 360 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 MRPS31Q92665 395 aaKnown RBP18.24■□□□□ 0.51
PHGDH-230ENST00000641927 NPY6RQ99463 290 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 LRRC3Q9BY71 257 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 CLDND1Q9NY35 253 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 RRN3Q9NYV6 651 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 REV3LO60673 3130 aa18.24■□□□□ 0.51
PHGDH-230ENST00000641927 GJA1P17302 382 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 POU3F3P20264 500 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-230ENST00000641927 MAN1A1P33908 653 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 SLC1A1P43005 524 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 CYP4F8P98187 520 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 EFEMP1Q12805 493 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 ADAM15Q13444 863 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 ANKRD54Q6NXT1 300 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 CC2D1AQ6P1N0 951 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-230ENST00000641927 SCYL2Q6P3W7 929 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 TMEM184AQ6ZMB5 413 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 NYAP1Q6ZVC0 841 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 TADA2BQ86TJ2 420 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 DQX1Q8TE96 717 aaKnown RBP18.23■□□□□ 0.51
PHGDH-230ENST00000641927 OLA1Q9NTK5 396 aaKnown RBP18.23■□□□□ 0.51
PHGDH-230ENST00000641927 DDIT4Q9NX09 232 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 SFMBT1Q9UHJ3 866 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 AMFRQ9UKV5 643 aa18.23■□□□□ 0.51
PHGDH-230ENST00000641927 MDM4O15151 490 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 FGF19O95750 216 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 TRUB2O95900 331 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 GBP1P32455 592 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 GJC1P36383 396 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 DNA2P51530 1060 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 NTHL1P78549 312 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 DEUP1Q05D60 604 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 ACAP1Q15027 740 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 RAB6CQ53S08 254 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 SNX30Q5VWJ9 437 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 SLFN11Q7Z7L1 901 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 TAC4Q86UU9 113 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 MIB1Q86YT6 1006 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 LEMD2Q8NC56 503 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 CMASQ8NFW8 434 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 WDR24Q96S15 920 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 CDK5RAP1Q96SZ6 601 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 RAB6CQ9H0N0 254 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 DNAI1Q9UI46 699 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 RASAL2Q9UJF2 1139 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 PACSIN2Q9UNF0 486 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 C2orf78A6NCI8 922 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 LRCH4O75427 683 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 POU2F2P09086 479 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 RDXP35241 583 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 ATP5C1P36542 298 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 CCR2P41597 374 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 ATXN1P54253 815 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 ETF1P62495 437 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 HABP4Q5JVS0 413 aaKnown RBP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 TXNDC8Q6A555 127 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 STRADAQ7RTN6 431 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 NT5DC3Q86UY8 548 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 MYLIPQ8WY64 445 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 RNF34Q969K3 372 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 NT5C3BQ969T7 300 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 SMOC2Q9H3U7 446 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHGDH-230ENST00000641927 MARCH2Q9P0N8 246 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 CALCOCO1Q9P1Z2 691 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 PCSK1NQ9UHG2 260 aa18.22■□□□□ 0.51
PHGDH-230ENST00000641927 ENC1O14682 589 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 MSI1O43347 362 aaKnown RBP18.21■□□□□ 0.51
PHGDH-230ENST00000641927 COCHO43405 550 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 NCK2O43639 380 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 ZNF500O60304 480 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-230ENST00000641927 EPHA5P54756 1037 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 HDAC4P56524 1084 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms