RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PDIK1LQ8N165 341 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 CCDC134Q9H6E4 229 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 LRRC4Q9HBW1 653 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 XPNPEP3Q9NQH7 507 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 CHST12Q9NRB3 414 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 TMPRSS4Q9NRS4 437 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 RAB6BQ9NRW1 208 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 KRT82Q9NSB4 513 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 ZMYND8Q9ULU4 1186 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-226ENST00000641756 CHMP2BQ9UQN3 213 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 MFHAS1Q9Y4C4 1052 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 ADAMTS4O75173 837 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 KIAA0754O94854 1291 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 MRPS5P82675 430 aaKnown RBP18.56■□□□□ 0.56
PHGDH-226ENST00000641756 SLC10A2Q12908 348 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-226ENST00000641756 KCNJ11Q14654 390 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 GKAP1Q5VSY0 366 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-226ENST00000641756 CACNA2D3Q8IZS8 1091 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 ATP11CQ8NB49 1132 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 KIF9Q9HAQ2 790 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 RABGEF1Q9UJ41 708 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-226ENST00000641756 MGEA5O60502 916 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 SPAG7O75391 227 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 GHRP10912 638 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 KCNA10Q16322 511 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 RNF187Q5TA31 235 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-226ENST00000641756 OTUD1Q5VV17 481 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-226ENST00000641756 C6orf89Q6UWU4 347 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 C3orf62Q6ZUJ4 267 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 HFE2Q6ZVN8 426 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 STRADAQ7RTN6 431 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 TRABD2AQ86V40 505 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 VSIG1Q86XK7 387 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 TDRPQ86YL5 185 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 IGDCC3Q8IVU1 814 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 PALM2Q8IXS6 379 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 CSPG4P5Q96PW8 444 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 SYT15Q9BQS2 421 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 PHACTR1Q9C0D0 580 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 PAK5Q9P286 719 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 PADI3Q9ULW8 664 aa18.56■□□□□ 0.56
PHGDH-226ENST00000641756 BCLAF3A2AJT9 711 aaKnown RBP18.55■□□□□ 0.56
PHGDH-226ENST00000641756 MYBPHLA2RUH7 354 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 I3L4J1 428 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 GPR182O15218 404 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 AVILO75366 819 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 DAB1O75553 588 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 FAM200BP0CF97 657 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 GOT1P17174 413 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 KRT15P19012 456 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 AMPD1P23109 780 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 YWHAZP63104 245 aaKnown RBP18.55■□□□□ 0.56
PHGDH-226ENST00000641756 SLC25A52Q3SY17 297 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 SIX6OS1Q8N1H7 587 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 CCDC110Q8TBZ0 833 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 FBF1Q8TES7 1133 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 CABS1Q96KC9 395 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 ETNK2Q9NVF9 386 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 SMAPO00193 183 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 PHBP35232 272 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 ELK3P41970 407 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 TKTL1P51854 596 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 PAN2Q504Q3 1202 aaKnown RBP18.55■□□□□ 0.56
PHGDH-226ENST00000641756 SYPL2Q5VXT5 272 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 RTP4Q96DX8 246 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 FZD10Q9ULW2 581 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 GIT1Q9Y2X7 761 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 ACTL7BQ9Y614 415 aa18.55■□□□□ 0.56
PHGDH-226ENST00000641756 CFAP69A5D8W1 941 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 ZNF487B1APH4 448 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 POMCP01189 267 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 ELNP15502 786 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 CACNA2D1P54289 1103 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 EFHC2Q5JST6 749 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 CTU1Q7Z7A3 348 aaKnown RBP18.54■□□□□ 0.56
PHGDH-226ENST00000641756 OTUD6BQ8N6M0 293 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 NETO2Q8NC67 525 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 KCTD13Q8WZ19 329 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 PCED1BQ96HM7 432 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 KCNK16Q96T55 309 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 TRABDQ9H4I3 376 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 NKIRAS1Q9NYS0 192 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 PSMC3IPQ9P2W1 217 aaPredicted RBP18.54■□□□□ 0.56
PHGDH-226ENST00000641756 GGA2Q9UJY4 613 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 NR2E3Q9Y5X4 410 aa18.54■□□□□ 0.56
PHGDH-226ENST00000641756 TCP11X1B4DZS4 312 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 NRP1O14786 923 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 CHADO15335 359 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 AP1G2O75843 785 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 LHX1P48742 406 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 LIG3P49916 1009 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 GEMIN4P57678 1058 aaKnown RBP18.53■□□□□ 0.56
PHGDH-226ENST00000641756 NME3Q13232 169 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 NCBP2-AS2Q69YL0 99 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 GPRIN1Q7Z2K8 1008 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 FAM35AQ86V20 835 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 CDKL3Q8IVW4 592 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-226ENST00000641756 C4orf33Q8N1A6 199 aa18.53■□□□□ 0.56
PHGDH-226ENST00000641756 SMOQ99835 787 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms