RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 NPNTQ6UXI9 565 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ARHGEF18Q6ZSZ5 1173 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ZNF598Q86UK7 904 aaKnown RBP15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ZDHHC17Q8IUH5 632 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 FUKQ8N0W3 1084 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 TEKT4Q8WW24 435 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 CKAP2Q8WWK9 683 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 NGRNQ9NPE2 291 aaKnown RBP15.7■□□□□ 0.1
TRIM3-215ENST00000639856 DDX43Q9NXZ2 648 aaKnown RBP15.7■□□□□ 0.1
TRIM3-215ENST00000639856 TSC2P49815 1807 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 GOLGA6L7A0A1B0GV03 622 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 E7ESA3 106 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 F8W810 466 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 LCP1P13796 627 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 DESP17661 470 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 PTPN1P18031 435 aaKnown RBP15.7■□□□□ 0.1
TRIM3-215ENST00000639856 PRMT2P55345 433 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ROR1Q01973 937 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 GAD2Q05329 585 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 KRT81Q14533 505 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ITIH4Q14624 930 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 RASA2Q15283 850 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 MDH1BQ5I0G3 518 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 SCYL2Q6P3W7 929 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 DSTYKQ6XUX3 929 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 TRABD2AQ86V40 505 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 TAX1BP1Q86VP1 789 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.7■□□□□ 0.1
TRIM3-215ENST00000639856 FAM172AQ8WUF8 416 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 TBCBQ99426 244 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 NCAPGQ9BPX3 1015 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 ELAC2Q9BQ52 826 aaKnown RBP15.7■□□□□ 0.1
TRIM3-215ENST00000639856 UBN1Q9NPG3 1134 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 CRTAC1Q9NQ79 661 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 SQORQ9Y6N5 450 aa15.7■□□□□ 0.1
TRIM3-215ENST00000639856 BANF1O75531 89 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 BEST1O76090 585 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 IL4RP24394 825 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 BRCC3P46736 316 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 GPX6P59796 221 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 MTFR1Q15390 333 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 FNBP1LQ5T0N5 605 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 DARS2Q6PI48 645 aaKnown RBP15.69■□□□□ 0.1
TRIM3-215ENST00000639856 CD300LGQ6UXG3 332 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 CAPN12Q6ZSI9 719 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 PAQR9Q6ZVX9 377 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 ZC3H18Q86VM9 953 aaKnown RBP15.69■□□□□ 0.1
TRIM3-215ENST00000639856 VSIG1Q86XK7 387 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 ANKMY2Q8IV38 441 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 PYROXD1Q8WU10 500 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 CCT6BQ92526 530 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 MLXIPLQ9NP71 852 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 NKIRAS1Q9NYS0 192 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 SLC24A2Q9UI40 661 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 CAPN7Q9Y6W3 813 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 CLUHO75153 1309 aa15.69■□□□□ 0.1
TRIM3-215ENST00000639856 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 TCRBV7S3A2A0A539 114 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 TCP11X1B4DZS4 312 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 B4GALT3O60512 393 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 B3GAT3O94766 335 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 TMEM63AO94886 807 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 ITGB1P05556 798 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 STX2P32856 288 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 RPL9P32969 192 aaKnown RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 PHBP35232 272 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 RABGGTBP53611 331 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 ACTN3Q08043 901 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 GRIK3Q13003 919 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 MSS51Q4VC12 460 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 PPP1R21Q6ZMI0 780 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 ATP11CQ8NB49 1132 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 HNRNPABQ99729 332 aaKnown RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 SNRNP25Q9BV90 132 aaKnown RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 ACTR5Q9H9F9 607 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 PCDH18Q9HCL0 1135 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 RGS18Q9NS28 235 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 FETUBQ9UGM5 382 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 XPO7Q9UIA9 1087 aaKnown RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 ZMYND8Q9ULU4 1186 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 C9IYK1 514 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 MDM4O15151 490 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 HDAC4P56524 1084 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 BASP1P80723 227 aaKnown RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 TTC31Q49AM3 519 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 ZC3H12AQ5D1E8 599 aaKnown RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 EFHC2Q5JST6 749 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 PDIK1LQ8N165 341 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 TAB3Q8N5C8 712 aaPredicted RBP15.68■□□□□ 0.1
TRIM3-215ENST00000639856 PLD5Q8N7P1 536 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 TET1Q8NFU7 2136 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 GDAP1Q8TB36 358 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 SGSM3Q96HU1 749 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 DEFB118Q96PH6 123 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 SYT15Q9BQS2 421 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 KDM4CQ9H3R0 1056 aa15.68■□□□□ 0.1
TRIM3-215ENST00000639856 GPATCH2LQ9NWQ4 482 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms