RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 NELFBQ8WX92 580 aa16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 NT5C1BQ96P26 610 aa16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 DCLK3Q9C098 648 aa16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 ARRDC1-AS1Q9H2J1 176 aa16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 MYOFQ9NZM1 2061 aa16.34■□□□□ 0.21
PTPRVP-204ENST00000639439 MYO16Q9Y6X6 1858 aa16.33■□□□□ 0.21
PTPRVP-204ENST00000639439 PPP1R3GB7ZBB8 358 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 XPO1O14980 1071 aaKnown RBP16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 MDM4O15151 490 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 CACNG3O60359 315 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 GNA14O95837 355 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 ZNF806P0C7X5 589 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 CD19P15391 556 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 BST2Q10589 180 aaKnown RBP16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 GOLGA7BQ2TAP0 167 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 GRAMD4Q6IC98 578 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 ANO7Q6IWH7 933 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 Q6ZNB5 142 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 TTC30AQ86WT1 665 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 MIB1Q86YT6 1006 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 SFTPA1Q8IWL2 248 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 DUSP15Q9H1R2 295 aaPredicted RBP16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 LRRC4Q9HBW1 653 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 DNAJC17Q9NVM6 304 aaKnown RBP16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 NUDT5Q9UKK9 219 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 TSPAN16Q9UKR8 245 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 STRIP2Q9ULQ0 834 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 STARD13Q9Y3M8 1113 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 KIAA1549LQ6ZVL6 1849 aa16.33■□□□□ 0.2
PTPRVP-204ENST00000639439 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 NEDD8-MDP1E9PL57 170 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 SGK1O00141 431 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 SLC30A4O14863 429 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 GADD45BO75293 160 aaPredicted RBP16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 STC2O76061 302 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 ZBED1O96006 694 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 PAEPP09466 180 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 SETSIPP0DME0 302 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 TYRP14679 529 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 BMP6P22004 513 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 TKTL1P51854 596 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 YWHAGP61981 247 aaKnown RBP eCLIP16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 PDE4CQ08493 712 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 LRMPQ12912 555 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 PAK1Q13153 545 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 C10orf76Q5T2E6 689 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 EMC10Q5UCC4 262 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 PM20D1Q6GTS8 502 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 TMEM92Q6UXU6 159 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 TPGS1Q6ZTW0 290 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 UBR7Q8N806 425 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 ZNF513Q8N8E2 541 aaPredicted RBP16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 C12orf50Q8NA57 414 aaPredicted RBP16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 MDGA1Q8NFP4 955 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 VPS45Q9NRW7 570 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 RASAL2Q9UJF2 1139 aa16.32■□□□□ 0.2
PTPRVP-204ENST00000639439 RALGAPA1Q6GYQ0 2036 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 ANTXRLA6NF34 631 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 O00370 1275 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 FGFR1OPO95684 399 aaKnown RBP16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 GBP1P32455 592 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 CHKAP35790 457 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 MPLP40238 635 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 EFEMP1Q12805 493 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 BYSLQ13895 437 aaKnown RBP16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 STILQ15468 1287 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 PLA2G2CQ5R387 149 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 TMEM270Q6UE05 265 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 PPM1KQ8N3J5 372 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 TPSD1Q9BZJ3 242 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 ULBP1Q9BZM6 244 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 OLA1Q9NTK5 396 aaKnown RBP16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 MARCH2Q9P0N8 246 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 CTNND2Q9UQB3 1225 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 NCOR2Q9Y618 2525 aa16.31■□□□□ 0.2
PTPRVP-204ENST00000639439 SPTBN2O15020 2390 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 BIN1O00499 593 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 DCLK1O15075 740 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 ADAM23O75077 832 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 HNRNPLP14866 589 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 MARSP56192 900 aaKnown RBP16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 AASDHQ4L235 1098 aaPredicted RBP16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 SDE2Q6IQ49 451 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 LCLAT1Q6UWP7 414 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 TRIM59Q8IWR1 403 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 SIX6OS1Q8N1H7 587 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 KCTD13Q8WZ19 329 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 SPACA7Q96KW9 195 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 IPO9Q96P70 1041 aaKnown RBP16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 BCCIPQ9P287 314 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 MYO18AQ92614 2054 aaKnown RBP16.3■□□□□ 0.2
PTPRVP-204ENST00000639439 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms