RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 COLGALT1Q8NBJ5 622 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ZIM3Q96PE6 472 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 TBCBQ99426 244 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 UPF3AQ9H1J1 476 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 L3MBTL1Q9Y468 752 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 SMAPO00193 183 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ATP5C1P36542 298 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 POU6F1Q14863 301 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 E2F5Q15329 346 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ZBTB41Q5SVQ8 909 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 HYIQ5T013 277 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 MRNIPQ6NTE8 343 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 LCA5Q86VQ0 697 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 SHC3Q92529 594 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 SERPINI1Q99574 410 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 VCX3AQ9NNX9 186 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 RRN3Q9NYV6 651 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 FAM208AQ9UK61 1670 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 SDR42E2A6NKP2 422 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 SERPINF2P08697 491 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 KRT4P19013 534 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 STX3Q13277 289 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 TUSC3Q13454 348 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 PCBP1Q15365 356 aaKnown RBP eCLIP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ZDHHC17Q8IUH5 632 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 TUBB6Q9BUF5 446 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 DHX33Q9H6R0 707 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 C10orf88Q9H8K7 445 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 TRMT13Q9NUP7 481 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 TUBGCP4Q9UGJ1 667 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 DDX20Q9UHI6 824 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 GIT1Q9Y2X7 761 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 OPHN1O60890 802 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 SELPP16109 830 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ERFP50548 548 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 CLNS1AP54105 237 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 VCPP55072 806 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 PSMD5Q16401 504 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 USP41Q3LFD5 358 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 C6orf10Q5SRN2 563 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 USP13Q92995 863 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ADA2Q9NZK5 511 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 PCDHGB4Q9UN71 923 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 TRIM33Q9UPN9 1127 aa14.05□□□□□ -0.16
SCARB2-215ENST00000639145 MRPS23Q9Y3D9 190 aaKnown RBP14.05□□□□□ -0.16
SCARB2-215ENST00000639145 ADCY6O43306 1168 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 CCNG2Q16589 344 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 C11orf63Q6NUN7 778 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 MYLPFQ96A32 169 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PRMT1Q99873 361 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 SAE1Q9UBE0 346 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 A0A1B0GUA9 196 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 HEATR9A2RTY3 570 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 H0Y3Z8 333 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PCDH8O95206 1070 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 ICAM3P32942 547 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 ARL4DP49703 201 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PAPD7Q5XG87 772 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 LLGL2Q6P1M3 1020 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 SLC24A5Q71RS6 500 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 WNT8BQ93098 351 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 TLR10Q9BXR5 811 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 FAM96AQ9H5X1 160 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 SMG5Q9UPR3 1016 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 TMEM120BA0PK00 339 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 RNF225M0QZC1 329 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 GPR25O00155 361 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 HSPA8P11142 646 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 CHN1P15882 459 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 KCNT2Q6UVM3 1135 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 ANKS3Q6ZW76 656 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 NT5DC3Q86UY8 548 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 LPCAT1Q8NF37 534 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 DBF4BQ8NFT6 615 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 C7orf43Q8WVR3 580 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PNKPQ96T60 521 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 FRMD8Q9BZ67 464 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 CDH9Q9ULB4 789 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 RRP15Q9Y3B9 282 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PLIN4Q96Q06 1357 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 ZMYM2Q9UBW7 1377 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 OR4Q2P0C623 313 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 GRIK3Q13003 919 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 CES5AQ6NT32 575 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 FAM71AQ8IYT1 594 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 ATAD1Q8NBU5 361 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 CDK5RAP1Q96SZ6 601 aaKnown RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 PKD2L2Q9NZM6 624 aa14.04□□□□□ -0.16
SCARB2-215ENST00000639145 UXTQ9UBK9 157 aaPredicted RBP14.04□□□□□ -0.16
SCARB2-215ENST00000639145 LTBP3Q9NS15 1303 aa14.03□□□□□ -0.16
SCARB2-215ENST00000639145 ZSCAN5CA6NGD5 496 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-215ENST00000639145 KPNA3O00505 521 aaPredicted RBP14.03□□□□□ -0.16
SCARB2-215ENST00000639145 USP12O75317 370 aa14.03□□□□□ -0.16
SCARB2-215ENST00000639145 NOS2P35228 1153 aa14.03□□□□□ -0.16
SCARB2-215ENST00000639145 ZNF697Q5TEC3 545 aa14.03□□□□□ -0.16
SCARB2-215ENST00000639145 DCLRE1AQ6PJP8 1040 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms