RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HMGCRP04035 888 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 TARBP2Q15633 366 aaKnown RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 LRRC36Q1X8D7 754 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ADGRF2Q8IZF7 708 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 UBA3Q8TBC4 463 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 PYDC1Q8WXC3 89 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ZNF778Q96MU6 729 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ELOVL4Q9GZR5 314 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 EBF3Q9H4W6 596 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 GPAMQ9HCL2 828 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 SOX13Q9UN79 622 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 PARP14Q460N5 1801 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 KLHL33A6NCF5 533 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ARHGAP42A6NI28 874 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 TRDMT1O14717 391 aaKnown RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 SORBS2O94875 1100 aaKnown RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 EGFRP00533 1210 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 GPD1P21695 349 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ZNF143P52747 638 aaPredicted RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 KRT81Q14533 505 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 FAM47CQ5HY64 1035 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 TMCO4Q5TGY1 634 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 KYAT3Q6YP21 454 aaKnown RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 RXFP2Q8WXD0 754 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 ANKRD36BP1Q96IX9 119 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 FAM192AQ9GZU8 254 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 KLC2Q9H0B6 622 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 QTRT2Q9H974 415 aaKnown RBP11.31□□□□□ -0.6
SNIP1-204ENST00000638725 DNAJC16Q9Y2G8 782 aa11.31□□□□□ -0.6
SNIP1-204ENST00000638725 A0A1B0GVG6 124 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 PRPSAP2O60256 369 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
SNIP1-204ENST00000638725 PDGFRAP16234 1089 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 GSTT1P30711 240 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 CRHR1P34998 444 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
SNIP1-204ENST00000638725 CDK18Q07002 472 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 TUBB3Q13509 450 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 HIC1Q14526 733 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 ACAP1Q15027 740 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 TBCCQ15814 346 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RALGPS1Q5JS13 557 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 SCYL2Q6P3W7 929 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RNF111Q6ZNA4 994 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 ZNF534Q76KX8 674 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 TMEM192Q8IY95 271 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 LRRC71Q8N4P6 559 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 PQLC3Q8N755 202 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RNF149Q8NC42 400 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 PPP1R14CQ8TAE6 165 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 BCO2Q9BYV7 579 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 C1orf21Q9H246 121 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 ACAD9Q9H845 621 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 S100A14Q9HCY8 104 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 DNAJB4Q9UDY4 337 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 SIX4Q9UIU6 781 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 BRWD3Q6RI45 1802 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 FAM159BA6NKW6 160 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 FKBP6O75344 327 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 CXCL8P10145 99 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 AOC1P19801 751 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 IL4RP24394 825 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 GRIA1P42261 906 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 GPD2P43304 727 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 GABRB2P47870 512 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 EPHB1P54762 984 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 HMGCS2P54868 508 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 BACE1P56817 501 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 BCAR1P56945 870 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 SURF1Q15526 300 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 CNPY1Q3B7I2 92 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 FASTKD1Q53R41 847 aaKnown RBP11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RASIP1Q5U651 963 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 OR6B2Q6IFH4 312 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 DENND5BQ6ZUT9 1274 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 UNC5BQ8IZJ1 945 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 CCDC33Q8N5R6 958 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 USP6NLQ92738 828 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 AZIN2Q96A70 460 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 RTP4Q96DX8 246 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 CNPY3Q9BT09 278 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 FRMD8Q9BZ67 464 aaPredicted RBP11.3□□□□□ -0.6
SNIP1-204ENST00000638725 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 THAP1Q9NVV9 213 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
SNIP1-204ENST00000638725 MGAMO43451 1857 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 IGKV6D-21A0A0A0MT36 114 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 C2CD4BA6NLJ0 364 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 APOL1O14791 398 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 BIRC5O15392 142 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 B4GALT5O43286 388 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
SNIP1-204ENST00000638725 PDE5AO76074 875 aa11.29□□□□□ -0.6
SNIP1-204ENST00000638725 METTL18O95568 372 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms