RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 TCEAL6Q6IPX3 200 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 CCDC186Q7Z3E2 898 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 PIGZQ86VD9 579 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 DRC7Q8IY82 874 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 CAMKK1Q8N5S9 505 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 ALLCQ8N6M5 410 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 RBBP8NLQ8NC74 664 aaPredicted RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 FBXL13Q8NEE6 735 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 PDZD8Q8NEN9 1154 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 MDGA1Q8NFP4 955 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 TCEAL3Q969E4 200 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 ZC3H10Q96K80 434 aaKnown RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 HINFPQ9BQA5 517 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 ARRDC1-AS1Q9H2J1 176 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 PNPLA8Q9NP80 782 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 CD93Q9NPY3 652 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 RRAGDQ9NQL2 400 aaPredicted RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 EBF1Q9UH73 591 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 MBD1Q9UIS9 605 aaPredicted RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 FBXO10Q9UK96 956 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 MMP17Q9ULZ9 603 aa8.26□□□□□ -1.09
PNKP-229ENST00000637897 TNRC6BQ9UPQ9 1833 aaKnown RBP8.26□□□□□ -1.09
PNKP-229ENST00000637897 THADAQ6YHU6 1953 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 A0A1W2PQF6 199 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 DCDC2BA2VCK2 349 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 CETN3O15182 167 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 SLC16A3O15427 465 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 ZNF500O60304 480 aaPredicted RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 RPP40O75818 363 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 STC2O76061 302 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 KRT13P13646 458 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 P4HA1P13674 534 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 RPL13P26373 211 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 ERCC5P28715 1186 aaPredicted RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 TIE1P35590 1138 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 EIF2DP41214 584 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 PDE6CP51160 858 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 FKBP3Q00688 224 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 KDSRQ06136 332 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 PDE4CQ08493 712 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 LRMPQ12912 555 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 CUL2Q13617 745 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 PUM1Q14671 1186 aaKnown RBP eCLIP8.25□□□□□ -1.09
PNKP-229ENST00000637897 CSRP2Q16527 193 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 PM20D1Q6GTS8 502 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 DPY19L2P1Q6NXN4 242 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 KLHDC10Q6PID8 442 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 ERMP1Q7Z2K6 904 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 ARHGEF19Q8IW93 802 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 ZNF276Q8N554 614 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 TXNDC5Q8NBS9 432 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 RLN3Q8WXF3 142 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 TMEM176AQ96HP8 235 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 FAXDC2Q96IV6 333 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 KREMEN1Q96MU8 473 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 PNKPQ96T60 521 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 GTPBP4Q9BZE4 634 aaKnown RBP8.25□□□□□ -1.09
PNKP-229ENST00000637897 TPSD1Q9BZJ3 242 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 SPHK2Q9NRA0 654 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 RMND1Q9NWS8 449 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 MARK1Q9P0L2 795 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 USP18Q9UMW8 372 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 SLC8A2Q9UPR5 921 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 SPEGQ15772 3267 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 PLXND1Q9Y4D7 1925 aa8.25□□□□□ -1.09
PNKP-229ENST00000637897 CACNA1BQ00975 2339 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 CACNA1EQ15878 2313 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ASCC3Q8N3C0 2202 aaKnown RBP8.24□□□□□ -1.09
PNKP-229ENST00000637897 O00370 1275 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 PMM2O15305 246 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 CBFA2T2O43439 604 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 LRP3O75074 770 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ATG13O75143 517 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 KIF20AO95235 890 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 KLF8O95600 359 aaPredicted RBP8.24□□□□□ -1.09
PNKP-229ENST00000637897 APBB3O95704 486 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 FYNP06241 537 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 EPB41P11171 864 aaKnown RBP8.24□□□□□ -1.09
PNKP-229ENST00000637897 GRIA2P42262 883 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 FMO5P49326 533 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ZNF132P52740 706 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 APBA1Q02410 837 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 NCAPHQ15003 741 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 MAP7D1Q3KQU3 841 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 DCAF17Q5H9S7 520 aaPredicted RBP8.24□□□□□ -1.09
PNKP-229ENST00000637897 FYB2Q5VWT5 728 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 EGFLAMQ63HQ2 1017 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 TMEM215Q68D42 235 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 KIAA1211LQ6NV74 962 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 DGLUCYQ7Z3D6 616 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 IRF2BP1Q8IU81 584 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 TRIM59Q8IWR1 403 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ANKRD52Q8NB46 1076 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 SPC24Q8NBT2 197 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 UBA3Q8TBC4 463 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ERLEC1Q96DZ1 483 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 MYEOVQ96EZ4 313 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 CNOT6LQ96LI5 555 aaKnown RBP8.24□□□□□ -1.09
PNKP-229ENST00000637897 HEXIM2Q96MH2 286 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms