RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TAB3Q8N5C8 712 aaPredicted RBP12.59□□□□□ -0.39
CLN8-212ENST00000637083 DCAKDQ8WVC6 231 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 KBTBD7Q8WVZ9 684 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 SLC44A1Q8WWI5 657 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 VPS11Q9H270 941 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 CXCL16Q9H2A7 254 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 GPATCH2LQ9NWQ4 482 aa12.59□□□□□ -0.39
CLN8-212ENST00000637083 TCRBV9S1A1TA0A576 114 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 KBTBD13C9JR72 458 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 EDF1O60869 148 aaKnown RBP12.58□□□□□ -0.4
CLN8-212ENST00000637083 KRT37O76014 449 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 UBOX5O94941 541 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 MYL3P08590 195 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 CCDC130P13994 396 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 MATKP42679 507 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 BNIP1Q12981 228 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 SPRED3Q2MJR0 410 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 TTC39BQ5VTQ0 682 aaPredicted RBP12.58□□□□□ -0.4
CLN8-212ENST00000637083 HEATR6Q6AI08 1181 aaKnown RBP12.58□□□□□ -0.4
CLN8-212ENST00000637083 SLC26A11Q86WA9 606 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 ADGRF2Q8IZF7 708 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 ZNF398Q8TD17 642 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 PPP1R13LQ8WUF5 828 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 HNRNPABQ99729 332 aaKnown RBP12.58□□□□□ -0.4
CLN8-212ENST00000637083 B3GNT5Q9BYG0 378 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 KIF9Q9HAQ2 790 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 XAB2Q9HCS7 855 aaKnown RBP12.58□□□□□ -0.4
CLN8-212ENST00000637083 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 ZNF180Q9UJW8 692 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 STAP1Q9ULZ2 295 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 NME7Q9Y5B8 376 aa12.58□□□□□ -0.4
CLN8-212ENST00000637083 CHUKO15111 745 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 KPNA6O60684 536 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 DAB1O75553 588 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
CLN8-212ENST00000637083 ZNF865P0CJ78 1059 aaPredicted RBP12.57□□□□□ -0.4
CLN8-212ENST00000637083 LRPAP1P30533 357 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 DNAJC3Q13217 504 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 CA9Q16790 459 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 SLC25A52Q3SY17 297 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 FAM47EQ6ZV65 393 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 BANPQ8N9N5 519 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 SLC2A14Q8TDB8 520 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 MZB1Q8WU39 189 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 WDR83Q9BRX9 315 aaKnown RBP12.57□□□□□ -0.4
CLN8-212ENST00000637083 DUSP16Q9BY84 665 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 ECT2Q9H8V3 914 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 TXLNGQ9NUQ3 528 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 SLC38A7Q9NVC3 462 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 ZC3H7BQ9UGR2 993 aaKnown RBP12.57□□□□□ -0.4
CLN8-212ENST00000637083 IPPQ9Y573 584 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 M0QZ92 97 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 TREHO43280 583 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 LPXNO60711 386 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 FAM155BO75949 473 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 TROVE2P10155 538 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLN8-212ENST00000637083 FGFR1P11362 822 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 FDFT1P37268 417 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 YWHAZP63104 245 aaKnown RBP12.57□□□□□ -0.4
CLN8-212ENST00000637083 CDK16Q00536 496 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLN8-212ENST00000637083 SLC1A5Q15758 541 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 RAB6CQ53S08 254 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 SPDYAQ5MJ70 313 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 UBXN11Q5T124 520 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 ICE2Q659A1 982 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 OLFML2BQ68BL8 750 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 LRRC6Q86X45 466 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 B3GALNT2Q8NCR0 500 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 MAGEC3Q8TD91 643 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 KCTD13Q8WZ19 329 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 ZNF75CPQ92670 426 aaPredicted RBP12.57□□□□□ -0.4
CLN8-212ENST00000637083 MTBPQ96DY7 904 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 APOPT1Q96IL0 206 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 QKIQ96PU8 341 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLN8-212ENST00000637083 RAB6CQ9H0N0 254 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 RRAGCQ9HB90 399 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 ETNK1Q9HBU6 452 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 KLK14Q9P0G3 267 aa12.57□□□□□ -0.4
CLN8-212ENST00000637083 H3BRJ5 948 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 MGRN1O60291 552 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 GABBR2O75899 941 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 APRTP07741 180 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 SNRPAP09012 282 aaKnown RBP12.56□□□□□ -0.4
CLN8-212ENST00000637083 LMO2P25791 158 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 NOS2P35228 1153 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 SULT1E1P49888 294 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 AIF1P55008 147 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 LILRA4P59901 499 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 EFTUD2Q15029 972 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLN8-212ENST00000637083 KBTBD12Q3ZCT8 623 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 CST9Q5W186 159 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 TWF2Q6IBS0 349 aaKnown RBP12.56□□□□□ -0.4
CLN8-212ENST00000637083 CGB2Q6NT52 195 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 FITM2Q8N6M3 262 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 TCP10LQ8TDR4 215 aa12.56□□□□□ -0.4
CLN8-212ENST00000637083 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms