RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 OVOS1Q6IE37 1185 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 DDX53Q86TM3 631 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 RHOT1Q8IXI2 618 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 THEM5Q8N1Q8 247 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 NDRG1Q92597 394 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 HSFY1Q96LI6 401 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 GPR62Q9BZJ7 368 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 CSNK1G1Q9HCP0 422 aa9.94□□□□□ -0.82
PDLIM5-223ENST00000627587 C3orf70A6NLC5 250 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 BHMG1C9JSJ3 638 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 TADA2AO75478 443 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 OAZ2O95190 189 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 FAM200BP0CF97 657 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 CTSAP10619 480 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 PSMA2P25787 234 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 CLCN5P51795 746 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ZNF143P52747 638 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 MAP3K7CLP57077 242 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 YWHAHQ04917 246 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ADCY2Q08462 1091 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ADIGQ0VDE8 80 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 LLGL1Q15334 1064 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 LONRF2Q1L5Z9 754 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 C15orf59Q2T9L4 293 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 CCDC14Q49A88 953 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 RAB41Q5JT25 222 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 LRRC38Q5VT99 294 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KIAA1841Q6NSI8 718 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC26A9Q7LBE3 791 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 BHLHA9Q7RTU4 235 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ADAT2Q7Z6V5 191 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC13A5Q86YT5 568 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 VPS52Q8N1B4 723 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 PRELID2Q8N945 189 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 RXFP2Q8WXD0 754 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KCTD13Q8WZ19 329 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 MYLPFQ96A32 169 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ACSF2Q96CM8 615 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 B3GALT6Q96L58 329 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 PEBP4Q96S96 227 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 HINFPQ9BQA5 517 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 APOL5Q9BWW9 433 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 DDX47Q9H0S4 455 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KLHL11Q9NVR0 708 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 CALCOCO1Q9P1Z2 691 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ADAM28Q9UKQ2 775 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ZSCAN5CA6NGD5 496 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 C2CD4DB7Z1M9 353 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 NT5C1B-RDH14C9J2C7 533 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 CCDC188H7C350 402 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KRIT1O00522 736 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 DPYSL4O14531 572 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ZMYND10O75800 440 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ALDH2P05091 517 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 GALTP07902 379 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 MYBL2P10244 700 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 LCP1P13796 627 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 DESP17661 470 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 TSPY1Q01534 308 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC7A5Q01650 507 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KLF1Q13351 362 aaPredicted RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 MRPL58Q14197 206 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ACAP1Q15027 740 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 MAPRE1Q15691 268 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 WDR93Q6P2C0 686 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ELMSAN1Q6PJG2 1045 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 SLC22A17Q8WUG5 538 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 IGSF21Q96ID5 467 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 CFAP57Q96MR6 1250 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 KRT12Q99456 494 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 EMILIN2Q9BXX0 1053 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ZBP1Q9H171 429 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 POMKQ9H5K3 350 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 ZNF446Q9NWS9 450 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 DPP7Q9UHL4 492 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 SSX2IPQ9Y2D8 614 aa9.93□□□□□ -0.82
PDLIM5-223ENST00000627587 GOLGA6L10A0A0M3HER8 536 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 TARSL2A2RTX5 802 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 SYN3O14994 580 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 SART1O43290 800 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 RAD51CO43502 376 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 AP1G2O75843 785 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 RNF8O76064 485 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 FYNP06241 537 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 TUBBP07437 444 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 GLI1P08151 1106 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 OR4Q2P0C623 313 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 RARAP10276 462 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 PDGFRAP16234 1089 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 GPD1P21695 349 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 MIPP30301 263 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 CA8P35219 290 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 GJC1P36383 396 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 SCNN1AP37088 669 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 NBL1P41271 181 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 CYP1B1Q16678 543 aa9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 RARS2Q5T160 578 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-223ENST00000627587 OTUD1Q5VV17 481 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms