RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 HIF1AQ16665 826 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 DCAF6Q58WW2 860 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 FAM171BQ6P995 826 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 DCLRE1AQ6PJP8 1040 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 CD300LGQ6UXG3 332 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 C4orf22Q6V702 233 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 CDKL3Q8IVW4 592 aaPredicted RBP22.93■■□□□ 1.26
PNKP-220ENST00000627232 CCDC185Q8N715 623 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 RTP3Q9BQQ7 232 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 PPCSQ9HAB8 311 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 CSNK1G1Q9HCP0 422 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 CREBZFQ9NS37 354 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 PAK5Q9P286 719 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 PRDM4Q9UKN5 801 aa22.93■■□□□ 1.26
PNKP-220ENST00000627232 CDH16O75309 829 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 TRPA1O75762 1119 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 B3GAT3O94766 335 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 NDUFV1P49821 464 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 PDIA2Q13087 525 aaKnown RBP22.92■■□□□ 1.26
PNKP-220ENST00000627232 CBLBQ13191 982 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 OTUD1Q5VV17 481 aaPredicted RBP22.92■■□□□ 1.26
PNKP-220ENST00000627232 TRAF7Q6Q0C0 670 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 ZMIZ2Q8NF64 920 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 CSPG4P5Q96PW8 444 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 SLC9A7Q96T83 725 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 ULBP1Q9BZM6 244 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 RRN3Q9NYV6 651 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 E7EVH7 732 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 ZBED1O96006 694 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 TSHRP16473 764 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 TYMPP19971 482 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 ARL4AP40617 200 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 AIF1P55008 147 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 INTS6LQ5JSJ4 861 aaKnown RBP22.92■■□□□ 1.26
PNKP-220ENST00000627232 ANKRD22Q5VYY1 191 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 PPP1R21Q6ZMI0 780 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 SCML4Q8N228 414 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 RSPH1Q8WYR4 309 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 NDRG1Q92597 394 aaKnown RBP22.92■■□□□ 1.26
PNKP-220ENST00000627232 SUSD3Q96L08 255 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 INPP5FQ9Y2H2 1132 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 HEY1Q9Y5J3 304 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 USP3Q9Y6I4 520 aa22.92■■□□□ 1.26
PNKP-220ENST00000627232 HHLA1C9JL84 531 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 CHADO15335 359 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 LHX8Q68G74 356 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 EXOC3L1Q86VI1 746 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 TDRPQ86YL5 185 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 ZBED8Q8IZ13 594 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 SLAIN1Q8ND83 568 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 IRGQQ8WZA9 623 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 MYLPFQ96A32 169 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 FRMD8Q9BZ67 464 aaPredicted RBP22.91■■□□□ 1.26
PNKP-220ENST00000627232 EURLQ9NYK6 297 aa22.91■■□□□ 1.26
PNKP-220ENST00000627232 ZMYND8Q9ULU4 1186 aaPredicted RBP22.91■■□□□ 1.26
PNKP-220ENST00000627232 COL4A4P53420 1690 aaPredicted RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 PTPRDP23468 1912 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 PATJQ8NI35 1801 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 A0A1W2PQ45 241 aaPredicted RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 A0A1W2PQY0 241 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 M0QYT0 321 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 NRP1O14786 923 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 KCNN4O15554 427 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 BRCC3P46736 316 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 BASP1P80723 227 aaKnown RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 FAM189BP81408 668 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 RNASELQ05823 741 aaKnown RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 MAPRE1Q15691 268 aaKnown RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 BZW1Q7L1Q6 419 aaKnown RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 FAM131BQ86XD5 332 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 THEM5Q8N1Q8 247 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 ARHGEF2Q92974 986 aaKnown RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 PKMYT1Q99640 499 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 SELENOSQ9BQE4 189 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 TRPV6Q9H1D0 765 aa22.9■■□□□ 1.26
PNKP-220ENST00000627232 HMX1Q9NP08 348 aaPredicted RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 XPO7Q9UIA9 1087 aaKnown RBP22.9■■□□□ 1.26
PNKP-220ENST00000627232 H3BRJ5 948 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 TRAPPC3O43617 180 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 INHAP05111 366 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 RBL1P28749 1068 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 PRMT2P55345 433 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 DEUP1Q05D60 604 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 KCNJ11Q14654 390 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 FASTKD3Q14CZ7 662 aaKnown RBP22.89■■□□□ 1.26
PNKP-220ENST00000627232 ARHGEF6Q15052 776 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 RASA2Q15283 850 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 SLC45A4Q5BKX6 768 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 GLB1LQ6UWU2 654 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 HFE2Q6ZVN8 426 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 SLC24A5Q71RS6 500 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 NLRP14Q86W24 1093 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 PDIK1LQ8N165 341 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 NTAN1Q96AB6 310 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 PGAP3Q96FM1 320 aaPredicted RBP22.89■■□□□ 1.26
PNKP-220ENST00000627232 KCNK16Q96T55 309 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 SEZ6LQ9BYH1 1024 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 ACTL7BQ9Y614 415 aa22.89■■□□□ 1.26
PNKP-220ENST00000627232 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.89■■□□□ 1.26
PNKP-220ENST00000627232 NLRC5Q86WI3 1866 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms