RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 IL1BP01584 269 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 CFIP05156 583 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 ENO2P09104 434 aaPredicted RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 CCL5P13501 91 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 SERPINB4P48594 390 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 ARRB1P49407 418 aaPredicted RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 TRMT10CQ7L0Y3 403 aaKnown RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 LUZP2Q86TE4 346 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NPAS4Q8IUM7 802 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NRSN1Q8IZ57 195 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 PCYOX1LQ8NBM8 494 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 CCDC197Q8NCU1 140 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 FEZF2Q8TBJ5 459 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 ATL1Q8WXF7 558 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 SENP8Q96LD8 212 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 TBCBQ99426 244 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 PRKD2Q9BZL6 878 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 RGS18Q9NS28 235 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 SLC45A1Q9Y2W3 748 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 DCTN3O75935 186 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NPTX2P47972 431 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 KYNUQ16719 465 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 CLEC16AQ2KHT3 1053 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 CYP4Z1Q86W10 505 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NUDCD3Q8IVD9 361 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 TRPM4Q8TD43 1214 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 STARD8Q92502 1023 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 MAML1Q92585 1016 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 FYNP06241 537 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NOS2P35228 1153 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 PRCPP42785 496 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 RTP1P59025 263 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 TAS2R50P59544 299 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 RPP38P78345 283 aaKnown RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 CCDC60Q8IWA6 550 aaPredicted RBP11.44□□□□□ -0.58
VPS8-227ENST00000625842 CXorf38Q8TB03 319 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 CLMNQ96JQ2 1002 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 NECTIN4Q96NY8 510 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 ATP13A3Q9H7F0 1226 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 PCDHGA4Q9Y5G9 962 aa11.44□□□□□ -0.58
VPS8-227ENST00000625842 GRID2IPA4D2P6 1211 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 MEFVO15553 781 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 RASGRP1O95267 797 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 CASRP41180 1078 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 GPR1P46091 355 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 TRIML2Q8N7C3 387 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 POMGNT2Q8NAT1 580 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 MYCBPAPQ8TBZ2 947 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 HERVK_113Q902F9 699 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 SH2D3AQ9BRG2 576 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 GULP1Q9UBP9 304 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 POLR1DQ9Y2S0 133 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 ASB3Q9Y575 518 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS8-227ENST00000625842 IL10P22301 178 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 RFX3P48380 749 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 ARSEP51690 589 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 PTK7Q13308 1070 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 TUSC3Q13454 348 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 TJAP1Q5JTD0 557 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 SERAC1Q96JX3 654 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 PGLYRP2Q96PD5 576 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 PI4K2AQ9BTU6 479 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 MRPL46Q9H2W6 279 aaKnown RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 ACTR5Q9H9F9 607 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 PCDHB3Q9Y5E6 796 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 SP100P23497 879 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 DPP6P42658 865 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 ILF3Q12906 894 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS8-227ENST00000625842 ZDHHC20Q5W0Z9 365 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 ESRP1Q6NXG1 681 aaKnown RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 RABEPKQ7Z6M1 372 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 MIEF1Q9NQG6 463 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 ZC3H7BQ9UGR2 993 aaKnown RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 IQGAP3Q86VI3 1631 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 GLP2RO95838 553 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 PYGMP11217 842 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 FOSL2P15408 326 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 GABRR2P28476 465 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 HOXC12P31275 282 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 SCNN1GP51170 649 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 CCR3P51677 355 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 AASDHQ4L235 1098 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 USP39Q53GS9 565 aaKnown RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 OSBPL10Q9BXB5 764 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 ING2Q9H160 280 aa11.43□□□□□ -0.58
VPS8-227ENST00000625842 KIAA1522Q9P206 1035 aaPredicted RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.43□□□□□ -0.58
VPS8-227ENST00000625842 RHPN2P1A8MT19 583 aa11.42□□□□□ -0.58
VPS8-227ENST00000625842 FGF10O15520 208 aaPredicted RBP11.42□□□□□ -0.58
VPS8-227ENST00000625842 KRT6AP02538 564 aa11.42□□□□□ -0.58
VPS8-227ENST00000625842 KRT6BP04259 564 aa11.42□□□□□ -0.58
VPS8-227ENST00000625842 KRT6CP48668 564 aa11.42□□□□□ -0.58
VPS8-227ENST00000625842 DHPSP49366 369 aaPredicted RBP11.42□□□□□ -0.58
VPS8-227ENST00000625842 YWHAZP63104 245 aaKnown RBP11.42□□□□□ -0.58
VPS8-227ENST00000625842 TTC23Q5W5X9 447 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms