RNA–Protein interactions for RNA: ENST00000622854.1

AP001065.3-201, humanhuman

BASIC

Gene AP001065.3, Length 646 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001065.3-201ENST00000622854 USP41Q3LFD5 358 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 SLC25A52Q3SY17 297 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 TFDP3Q5H9I0 405 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 STRADAQ7RTN6 431 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 BNIPLQ7Z465 357 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 FAM131BQ86XD5 332 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 SLC7A14Q8TBB6 771 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 ADAM32Q8TC27 787 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 TEKT4Q8WW24 435 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 MAIP1Q8WWC4 291 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 CASKIN2Q8WXE0 1202 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 PIK3R5Q8WYR1 880 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 EDEM1Q92611 657 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 RUBCNQ92622 972 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 NT5C3BQ969T7 300 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 HAUS1Q96CS2 278 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 C8orf48Q96LL4 319 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 HERC2P3Q9BVR0 1158 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 LRRC19Q9H756 370 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 EPB41L5Q9HCM4 733 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 GDF3Q9NR23 364 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 COX16Q9P0S2 106 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 CDY1Q9Y6F8 540 aa11.28□□□□□ -0.6
AP001065.3-201ENST00000622854 M0QYT0 321 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 CAPN9O14815 690 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 TRIM66O15016 1216 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 TJP3O95049 919 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 SOD2P04179 222 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 TUBBP07437 444 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 NCAM1P13591 858 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 RDXP35241 583 aaKnown RBP11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 FNTAP49354 379 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 USP46P62068 366 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 ROR1Q01973 937 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 NME3Q13232 169 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 DHX34Q14147 1143 aaKnown RBP11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 DPYSL3Q14195 570 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 KRT81Q14533 505 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 TMEM240Q5SV17 173 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 BSPRYQ5W0U4 402 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 CCDC137Q6PK04 289 aaKnown RBP11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 VSTM1Q6UX27 236 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 MAATS1Q7Z4T9 603 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 SCD5Q86SK9 330 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 JAMLQ86YT9 394 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 RFX6Q8HWS3 928 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 SCML4Q8N228 414 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 GPR152Q8TDT2 470 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 TMEM169Q96HH4 297 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 SEPT5Q99719 369 aaPredicted RBP11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 CALN1Q9BXU9 219 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 MAGEB5Q9BZ81 275 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 PCDH18Q9HCL0 1135 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 TMPRSS4Q9NRS4 437 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 PIGVQ9NUD9 493 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 PCYOX1Q9UHG3 505 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 ZMYND8Q9ULU4 1186 aaPredicted RBP11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 STAP1Q9ULZ2 295 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 AP4E1Q9UPM8 1137 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 BACE2Q9Y5Z0 518 aa11.27□□□□□ -0.61
AP001065.3-201ENST00000622854 WDR27A2RRH5 827 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 MDM4O15151 490 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 CST8O60676 142 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 ENDOD1O94919 500 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 GJB5O95377 273 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 HAPLN1P10915 354 aaPredicted RBP11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 MCM3P25205 808 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 TNFRSF8P28908 595 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 OR1D2P34982 312 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 GLUD2P49448 558 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 CARSP49589 748 aaKnown RBP11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 YWHAGP61981 247 aaKnown RBP eCLIP11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 HTRA4P83105 476 aaPredicted RBP11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 DSG1Q02413 1049 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 DEUP1Q05D60 604 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 DUSP4Q13115 394 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 MGAT5BQ3V5L5 792 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 BOLA3Q53S33 107 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 ERMARDQ5T6L9 678 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 SLC8B1Q6J4K2 584 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 KIAA1841Q6NSI8 718 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 TMCO3Q6UWJ1 677 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 CCNI2Q6ZMN8 369 aaPredicted RBP11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 BBS12Q6ZW61 710 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 TAC4Q86UU9 113 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 DDX42Q86XP3 938 aaKnown RBP eCLIP11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 IFT20Q8IY31 132 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 CCDC105Q8IYK2 499 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 NUP93Q8N1F7 819 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 SPPL2BQ8TCT7 592 aa11.26□□□□□ -0.61
AP001065.3-201ENST00000622854 DQX1Q8TE96 717 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms