RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 BTBD8Q5XKL5 378 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 RNF135Q8IUD6 432 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 ZDHHC14Q8IZN3 488 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 ING5Q8WYH8 240 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 NUP85Q9BW27 656 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 PYCARDQ9ULZ3 195 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 TFR2Q9UP52 801 aa20.75■□□□□ 0.91
PDLIM2-221ENST00000622702 TMEM191CA6NGB0 347 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 DLL1O00548 723 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 MOSPD3O75425 235 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 MTA2O94776 668 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 GJB6O95452 261 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 RALAP11233 206 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 RFC1P35251 1148 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 FLT3P36888 993 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 RPL7AP62424 266 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 KIF5AQ12840 1032 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 DCUN1D2Q6PH85 259 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 DEFB106AQ8N104 65 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 JOSD2Q8TAC2 188 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 SHKBP1Q8TBC3 707 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 SLC35G2Q8TBE7 412 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 MRPS31Q92665 395 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 FGF13Q92913 245 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 TRIM44Q96DX7 344 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 TCEAL4Q96EI5 215 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 MCEEQ96PE7 176 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 ATXN3LQ9H3M9 355 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 CTTNBP2NLQ9P2B4 639 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 LIMD1Q9UGP4 676 aa20.74■□□□□ 0.91
PDLIM2-221ENST00000622702 DOCK8Q8NF50 2099 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 A0A1W2PRU2 124 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 C2CD4BA6NLJ0 364 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 SOBPA7XYQ1 873 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 TNFRSF10AO00220 468 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 TLR5O60602 858 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 RARGP13631 454 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 PFKLP17858 780 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 NOS2P35228 1153 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 MATKP42679 507 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 HADHBP55084 474 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 RNASE9P60153 205 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 HECTD3Q5T447 861 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 TRNP1Q6NT89 227 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 ZNF564Q8TBZ8 553 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 FNIP1Q8TF40 1166 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 EDEM1Q92611 657 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 CDK5RAP1Q96SZ6 601 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 DDX23Q9BUQ8 820 aaKnown RBP20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 TSGA10Q9BZW7 698 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 CDH7Q9ULB5 785 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 OBSL1O75147 1896 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 ANAPC1Q9H1A4 1944 aa20.73■□□□□ 0.91
PDLIM2-221ENST00000622702 CUL9Q8IWT3 2517 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 A0A0U1RQJ8 604 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 NRG2O14511 850 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 CAPN9O14815 690 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 ABL1P00519 1130 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 OAS1P00973 400 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 LAMP2P13473 410 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 NCAM1P13591 858 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 CEBPBP17676 345 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 DDX6P26196 483 aaKnown RBP eCLIP20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 SYPL2Q5VXT5 272 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 DENND4CQ5VZ89 1909 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 MSANTD2Q6P1R3 559 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 KLHDC10Q6PID8 442 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 TADA2BQ86TJ2 420 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 NPAS3Q8IXF0 933 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 EMC1Q8N766 993 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 ATRIPQ8WXE1 791 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 OSGEPQ9NPF4 335 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 OLA1Q9NTK5 396 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 RRN3Q9NYV6 651 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 EPS15L1Q9UBC2 864 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 ZMYM5Q9UJ78 669 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 NAALADL1Q9UQQ1 740 aa20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 ZFP37Q9Y6Q3 630 aaPredicted RBP20.72■□□□□ 0.91
PDLIM2-221ENST00000622702 TRIOO75962 3097 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 DPYSL4O14531 572 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 ZSCAN12O43309 604 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 PDGFRAP16234 1089 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 GJA1P17302 382 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 ARHGAP25P42331 645 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 CYP4F8P98187 520 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 ARHGAP15Q53QZ3 475 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 DCAF6Q58WW2 860 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 RNF139Q8WU17 664 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 RXFP2Q8WXD0 754 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 NT5C3BQ969T7 300 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 CALR3Q96L12 384 aaKnown RBP20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 TRIM7Q9C029 511 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 CCSER2Q9H7U1 834 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 SALL4Q9UJQ4 1053 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 STAP1Q9ULZ2 295 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 DUSP10Q9Y6W6 482 aa20.71■□□□□ 0.91
PDLIM2-221ENST00000622702 KRT86O43790 486 aa20.7■□□□□ 0.9
PDLIM2-221ENST00000622702 OLFM2O95897 454 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms