RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ZNF618Q5T7W0 954 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 IZUMO3Q5VZ72 239 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 CYP4V2Q6ZWL3 525 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 ZBTB46Q86UZ6 589 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 SDR42E1Q8WUS8 393 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 LARP4BQ92615 738 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 HERC2P3Q9BVR0 1158 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 C12orf65Q9H3J6 166 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 CCDC177Q9NQR7 707 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 BCAP29Q9UHQ4 241 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 PFDN2Q9UHV9 154 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 KIAA1257Q9ULG3 409 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 JAG2Q9Y219 1238 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 POMPQ9Y244 141 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 PCDHGA11Q9Y5H2 935 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 A0A1B0GTW7 788 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 CSDE1O75534 798 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 GABBR2O75899 941 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 ABCB1P08183 1280 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 ALOX5P09917 674 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 MCF2P10911 925 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 BGNP21810 368 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 TAF12Q16514 161 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 ZBED5Q49AG3 693 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 CCDC58Q4VC31 144 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 RALGPS1Q5JS13 557 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 FOXR2Q6PJQ5 311 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 SETD3Q86TU7 594 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 SLC15A4Q8N697 577 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 C12orf50Q8NA57 414 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 ADCY4Q8NFM4 1077 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 HSPH1Q92598 858 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 RMND5BQ96G75 393 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 GCOM2Q9BZD3 368 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 DCLK3Q9C098 648 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 SLC17A7Q9P2U7 560 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 SMIM22K7EJ46 135 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 ZNF701M0R085 212 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 ADAMTS3O15072 1205 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 CLDN3O15551 220 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 THOP1P52888 689 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 BASP1P80723 227 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 OTUD4Q01804 1114 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 GNA12Q03113 381 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 PDIA2Q13087 525 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 PTK2BQ14289 1009 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 BBS9Q3SYG4 887 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 FAM26FQ5R3K3 315 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 C11orf63Q6NUN7 778 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 C16orf54Q6UWD8 224 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 ARID3BQ8IVW6 561 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 SLC38A6Q8IZM9 456 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 ALKBH8Q96BT7 664 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 ZNF512Q96ME7 567 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 KLF6Q99612 283 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 PLA2G12BQ9BX93 195 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 SSU72Q9NP77 194 aaKnown RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 AVENQ9NQS1 362 aaPredicted RBP8.18□□□□□ -1.1
VPS11-209ENST00000622309 CDH7Q9ULB5 785 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 COG5Q9UP83 839 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 EXOC7Q9UPT5 735 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 B3GNT3Q9Y2A9 372 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 A0A1W2PPW3 197 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 ARHGEF37A1IGU5 675 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 STMND1H3BQB6 276 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 TAF4O00268 1085 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 PROCP04070 461 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 GYS1P13807 737 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 NELFEP18615 380 aaKnown RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 GCAP28676 217 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 NDST2P52849 883 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 COPAP53621 1224 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 MLLT1Q03111 559 aaPredicted RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 TUBA3CQ13748 450 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 PRKD1Q15139 912 aaPredicted RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 PFKFB3Q16875 520 aaPredicted RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 PPM1LQ5SGD2 360 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 ZNF34Q8IZ26 560 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 NATD1Q8N6N6 113 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 Q8N9G6 341 aaPredicted RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 ACMSDQ8TDX5 336 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 SLCO2A1Q92959 643 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 GLMNQ92990 594 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 ZSCAN10Q96SZ4 725 aaPredicted RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 C17orf80Q9BSJ5 609 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 BMP2KQ9NSY1 1161 aaPredicted RBP8.17□□□□□ -1.1
VPS11-209ENST00000622309 TFCP2L1Q9NZI6 479 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 POLG2Q9UHN1 485 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 SLC24A2Q9UI40 661 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 CDH22Q9UJ99 828 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 POLIQ9UNA4 740 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 SPEF1Q9Y4P9 236 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 ZNF536O15090 1300 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 FAM205AQ6ZU69 1335 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 CNTNAP5Q8WYK1 1306 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 CYP2D7A0A087X1C5 515 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 ILVBLA1L0T0 632 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 ZNF839A8K0R7 811 aa8.17□□□□□ -1.1
VPS11-209ENST00000622309 CDK2AP1O14519 115 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms