RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 EFTUD2Q15029 972 aaKnown RBP eCLIP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TAF5Q15542 800 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 KIF19Q2TAC6 998 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 POLNQ7Z5Q5 900 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 YTHDF3Q7Z739 585 aaKnown RBP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 ZNF410Q86VK4 478 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 NHSL1Q5SYE7 1610 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TM9SF1O15321 606 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 ANP32DO95626 131 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 SERPINB4P48594 390 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 RABGAP1LQ5R372 815 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 ZCCHC23Q6ZST2 131 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 C18orf25Q96B23 403 aaPredicted RBP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 MYLK2Q9H1R3 596 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 SARS2Q9NP81 518 aaKnown RBP13.7□□□□□ -0.22
SIRPA-204ENST00000622179 NDE1Q9NXR1 346 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 TRIM33Q9UPN9 1127 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 GRIN2DO15399 1336 aa13.7□□□□□ -0.22
SIRPA-204ENST00000622179 ATP6V1G2O95670 118 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 MGAT1P26572 445 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GLRBP48167 497 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ATXN3P54252 364 aaPredicted RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 AP2B1P63010 937 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 NSUN2Q08J23 767 aaKnown RBP eCLIP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 MTFR1Q15390 333 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 PPHLN1Q8NEY8 458 aaKnown RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 C12orf42Q96LP6 360 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 MRPL45Q9BRJ2 306 aaKnown RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ADA2Q9NZK5 511 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GOLGA8QA0A0J9YX86 632 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GOLGA8OA6NCC3 632 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GOLGA8NF8WBI6 632 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 AVPR1AP37288 418 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 PRCCQ92733 491 aaPredicted RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 SYT15Q9BQS2 421 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 Q9H521 79 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 RNF103O00237 685 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ETFBP38117 255 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 CDKN2BP42772 138 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 C1orf220Q5T0J3 134 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 KIRREL3Q8IZU9 778 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 MTBPQ96DY7 904 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ELMO2Q96JJ3 720 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GAD1Q99259 594 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ETNK2Q9NVF9 386 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 TJP2Q9UDY2 1190 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 TYW5A2RUC4 315 aaKnown RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 SRRM3A6NNA2 597 aaPredicted RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ALOX15BO15296 676 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 PMM2O15305 246 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 KCNJ2P63252 427 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 TXNRD3NBQ6F5E7 133 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GLB1LQ6UWU2 654 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 XYLT1Q86Y38 959 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 RMDN1Q96DB5 314 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 NXF3Q9H4D5 531 aaKnown RBP13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GOLGA2P5Q9HBQ8 144 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 ZFYVE28Q9HCC9 887 aa13.69□□□□□ -0.22
SIRPA-204ENST00000622179 GOLGA8TH3BQL2 631 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 AIM2O14862 343 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 MSCO60682 206 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 ARIH2O95376 493 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 ZNF235Q14590 738 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 WSCD1Q658N2 575 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 STRA8Q7Z7C7 330 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 TRABD2AQ86V40 505 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 PIP4K2CQ8TBX8 421 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 UNKQ9C0B0 810 aaKnown RBP13.68□□□□□ -0.22
SIRPA-204ENST00000622179 C12orf65Q9H3J6 166 aaKnown RBP13.68□□□□□ -0.22
SIRPA-204ENST00000622179 KCNA4P22459 653 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 SERPINB3P29508 390 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 NAPEPLDQ6IQ20 393 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 PIGZQ86VD9 579 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 SPATA24Q86W54 205 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 NT5DC4Q86YG4 428 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 MIB1Q86YT6 1006 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 TLCD1Q96CP7 247 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 TRIM62Q9BVG3 475 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 DNAJC16Q9Y2G8 782 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 ANGPTL3Q9Y5C1 460 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 MLH1P40692 756 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 RGS2P41220 211 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 ABCG1P45844 678 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 RASA2Q15283 850 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 IQSEC1Q6DN90 963 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 C12orf50Q8NA57 414 aaPredicted RBP13.68□□□□□ -0.22
SIRPA-204ENST00000622179 MAGEB5Q9BZ81 275 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
SIRPA-204ENST00000622179 C2CD2Q9Y426 696 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 CILPO75339 1184 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 DGKIO75912 1065 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 USP17L7P0C7H9 530 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 POLE2P56282 527 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 IL31Q6EBC2 164 aa13.68□□□□□ -0.22
SIRPA-204ENST00000622179 C16orf46Q6P387 395 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms