RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PPM1NQ8N819 430 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 FAM172AQ8WUF8 416 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 PIWIL1Q96J94 861 aaKnown RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 SIGLEC10Q96LC7 697 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 C7orf26Q96N11 449 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 QKIQ96PU8 341 aaKnown RBP eCLIP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 SRPK1Q96SB4 655 aaKnown RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 EBNA1BP2Q99848 306 aaKnown RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 SGIP1Q9BQI5 828 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 BTBD10Q9BSF8 475 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 CADM1Q9BY67 442 aaKnown RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 GCOM2Q9BZD3 368 aaPredicted RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 NRDE2Q9H7Z3 1164 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 VTA1Q9NP79 307 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 SMYD2Q9NRG4 433 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 GPATCH2LQ9NWQ4 482 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 KCNK4Q9NYG8 393 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 SIRPGQ9P1W8 387 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZC3H7BQ9UGR2 993 aaKnown RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 PLLPQ9Y342 182 aa9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 PDCD11Q14690 1871 aaKnown RBP9.98□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC15A5A6NIM6 579 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 CXorf49A8MYA2 514 aaPredicted RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 BIRC5O15392 142 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 GSC2O15499 205 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 PAPSS1O43252 624 aaPredicted RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 DGKIO75912 1065 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 PIAS1O75925 651 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 KRT38O76015 456 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 RPSAP08865 295 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 CYP2C8P10632 490 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 GM2AP17900 193 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 CYP2F1P24903 491 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 L1CAMP32004 1257 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 RGS7P49802 495 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 HDAC4P56524 1084 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 IGBP1P78318 339 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 SEMA5AQ13591 1074 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZBTB6Q15916 424 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZNF792Q3KQV3 632 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ANKRD20A2Q5SQ80 823 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 PPP1R26Q5T8A7 1209 aaPredicted RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ANKRD20A1Q5TYW2 823 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ANKRD20A3Q5VUR7 823 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ATG16L1Q676U5 607 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 UNC5AQ6ZN44 842 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZNF534Q76KX8 674 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ARMCX2Q7L311 632 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 FASTKD5Q7L8L6 764 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC26A9Q7LBE3 791 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 APBB1IPQ7Z5R6 666 aaPredicted RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 LRRC52Q8N7C0 313 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 PPTC7Q8NI37 304 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 GSDMBQ8TAX9 411 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 TTC17Q96AE7 1141 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 MIEF2Q96C03 454 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 DCPSQ96C86 337 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 OTUD5Q96G74 571 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 NUDCD1Q96RS6 583 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 MIPEPQ99797 713 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 MMADHCQ9H3L0 296 aaPredicted RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 DCLRE1BQ9H816 532 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 XAB2Q9HCS7 855 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 NGRNQ9NPE2 291 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 ADARB2Q9NS39 739 aaKnown RBP9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 HESX1Q9UBX0 185 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 DCTN4Q9UJW0 460 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 AKT3Q9Y243 479 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 PCDHA11Q9Y5I1 949 aa9.97□□□□□ -0.81
IGHV3-54-201ENST00000622166 SBF1O95248 1867 aa9.96□□□□□ -0.81
IGHV3-54-201ENST00000622166 A0A0G2JND7 137 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 HACD1B0YJ81 288 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 ADM5C9JUS6 153 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 FCHO1O14526 889 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 KIF1CO43896 1103 aaKnown RBP9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 AVILO75366 819 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 CSDE1O75534 798 aaKnown RBP9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 GRAP2O75791 330 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 LUC7L3O95232 432 aaKnown RBP9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 METTL18O95568 372 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 VTNP04004 478 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 MLNP12872 115 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 HOXD8P13378 290 aaPredicted RBP9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 CNTFP26441 200 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 SERPINB3P29508 390 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 CRHR1P34998 444 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 FDFT1P37268 417 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 OCRLQ01968 901 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 NAB1Q13506 487 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 CDO1Q16878 200 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 NBPF20Q3BBV1 942 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 DLK2Q6UY11 383 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 CDHR3Q6ZTQ4 885 aa9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
IGHV3-54-201ENST00000622166 MARK2Q7KZI7 788 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms