RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 MRPS23Q9Y3D9 190 aaKnown RBP8.92□□□□□ -0.98
ABCB1-211ENST00000622132 MTSS1O43312 755 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 MMP8P22894 467 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 WARSP23381 471 aaKnown RBP8.92□□□□□ -0.98
ABCB1-211ENST00000622132 ASPAP45381 313 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 IFNAR2P48551 515 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 RPL7AP62424 266 aaKnown RBP8.92□□□□□ -0.98
ABCB1-211ENST00000622132 MRPS5P82675 430 aaKnown RBP8.92□□□□□ -0.98
ABCB1-211ENST00000622132 HGSNATQ68CP4 663 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 SPOCD1Q6ZMY3 1216 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 BADQ92934 168 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 ASIC4Q96FT7 647 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 FAM210AQ96ND0 272 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 CPXM1Q96SM3 734 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 C11orf84Q9BUA3 381 aaPredicted RBP8.92□□□□□ -0.98
ABCB1-211ENST00000622132 TRIM4Q9C037 500 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 ISCUQ9H1K1 167 aa8.92□□□□□ -0.98
ABCB1-211ENST00000622132 DYTNA2CJ06 578 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 C3orf70A6NLC5 250 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 GOLGA8CPA6NN73 597 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 RARGP13631 454 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ETFBP38117 255 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 MSH2P43246 934 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 CARNMT1Q8N4J0 409 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 CCDC33Q8N5R6 958 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 SKA2Q8WVK7 121 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ATG4AQ8WYN0 398 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TFAP2BQ92481 460 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 B3GALT6Q96L58 329 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ZMAT2Q96NC0 199 aaKnown RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TRIM51Q9BSJ1 452 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 APOL5Q9BWW9 433 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TTYH3Q9C0H2 523 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TKTL2Q9H0I9 626 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 EPC1Q9H2F5 836 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 DYRK4Q9NR20 520 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 EXOC1LA0A1B0GW35 172 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ZBTB42B2RXF5 422 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 GIPC1O14908 333 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 SEC31AO94979 1220 aaKnown RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 CYP1A2P05177 515 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 GATMP50440 423 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ZNF143P52747 638 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 JAM2P57087 298 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 P3H1Q32P28 736 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 HP1BP3Q5SSJ5 553 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 NUGGCQ68CJ6 796 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 RINLQ6ZS11 566 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 MON1AQ86VX9 555 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ANKRD42Q8N9B4 389 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 FBXO22Q8NEZ5 403 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 CCDC110Q8TBZ0 833 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TFB1MQ8WVM0 346 aaKnown RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 HNRNPABQ99729 332 aaKnown RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TCF25Q9BQ70 676 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 OXCT2Q9BYC2 517 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 MCOLN1Q9GZU1 580 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ABCB6Q9NP58 842 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 WEE1P30291 646 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ZC3H12AQ5D1E8 599 aaKnown RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 ZNF697Q5TEC3 545 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 SYDE1Q6ZW31 735 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TFAP2DQ7Z6R9 452 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 CPLX4Q7Z7G2 160 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 FAM71DQ8N9W8 422 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 SMG8Q8ND04 991 aaKnown RBP8.91□□□□□ -0.98
ABCB1-211ENST00000622132 SUSD3Q96L08 255 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 SIX4Q9UIU6 781 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 QSER1Q2KHR3 1735 aa8.91□□□□□ -0.98
ABCB1-211ENST00000622132 TLR5O60602 858 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 TSPAN3O60637 253 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PRLRP16471 622 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PAMP19021 973 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 STIP1P31948 543 aaKnown RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 SLCO1A2P46721 670 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 SLC11A1P49279 550 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 SESN2P58004 480 aaPredicted RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 COPS2P61201 443 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 OTUD4Q01804 1114 aaKnown RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 TAF10Q12962 218 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 DIS3LQ8TF46 1054 aaKnown RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 MAGEB5Q9BZ81 275 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 TRIM7Q9C029 511 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 TMEM165Q9HC07 324 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 CHCHD3Q9NX63 227 aaKnown RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PAK5Q9P286 719 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PTPRJQ12913 1337 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 TULP2O00295 520 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 ATP9BO43861 1147 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 GABRR2P28476 465 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 ALDH3A1P30838 453 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 NDUFV1P49821 464 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 TUBP50607 506 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PDIA2Q13087 525 aaKnown RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PAPD7Q5XG87 772 aaKnown RBP8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PPP2R2DQ66LE6 453 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 PMF1Q6P1K2 205 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 RAPH1Q70E73 1250 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 NT5DC3Q86UY8 548 aa8.9□□□□□ -0.98
ABCB1-211ENST00000622132 JAMLQ86YT9 394 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms