RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 FAM189A1O60320 539 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 METTL18O95568 372 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 STAT5BP51692 787 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ATXN1P54253 815 aaKnown RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 DSG1Q02413 1049 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 NOMO1Q15155 1222 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ATG16L1Q676U5 607 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PPP1R2P3Q6NXS1 205 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 DEPDC1BQ8WUY9 529 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ANGPTL2Q9UKU9 493 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PCDHGC3Q9UN70 934 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 DNAJC16Q9Y2G8 782 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 HMX2A2RU54 273 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 OGTO15294 1046 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 OPHN1O60890 802 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 TM7SF2O76062 418 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 STIP1P31948 543 aaKnown RBP16.34■□□□□ 0.21
NPHP4-211ENST00000622020 LY6KQ17RY6 165 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 PLD5Q8N7P1 536 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 MOCOSQ96EN8 888 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 ACO2Q99798 780 aaKnown RBP16.34■□□□□ 0.21
NPHP4-211ENST00000622020 G3BP2Q9UN86 482 aaKnown RBP16.34■□□□□ 0.21
NPHP4-211ENST00000622020 RNASEH1O60930 286 aaKnown RBP16.34■□□□□ 0.21
NPHP4-211ENST00000622020 NCF2P19878 526 aaPredicted RBP16.34■□□□□ 0.21
NPHP4-211ENST00000622020 BACE1P56817 501 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 AP2B1P63010 937 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 LAMTOR4Q0VGL1 99 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 CDC16Q13042 620 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 CES3Q6UWW8 571 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 GALNT15Q8N3T1 639 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 SLC4A11Q8NBS3 891 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 ANKRD36BP1Q96IX9 119 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 TEPSINQ96N21 525 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 ECSITQ9BQ95 431 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 MIS12Q9H081 205 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 ETNK2Q9NVF9 386 aa16.34■□□□□ 0.21
NPHP4-211ENST00000622020 HBS1LQ9Y450 684 aaKnown RBP16.34■□□□□ 0.21
NPHP4-211ENST00000622020 COL2A1P02458 1487 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-211ENST00000622020 SLC15A5A6NIM6 579 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 NDC80O14777 642 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 PIGRP01833 764 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 PROCP04070 461 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 TFE3P19532 575 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-211ENST00000622020 TCF7P36402 384 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-211ENST00000622020 PTPN11Q06124 597 aaPredicted RBP16.33■□□□□ 0.21
NPHP4-211ENST00000622020 STXBP2Q15833 593 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 FASTKD1Q53R41 847 aaKnown RBP16.33■□□□□ 0.21
NPHP4-211ENST00000622020 RASSF3Q86WH2 238 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 ADGRF2Q8IZF7 708 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 STKLD1Q8NE28 680 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 WRNIP1Q96S55 665 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 XAB2Q9HCS7 855 aaKnown RBP16.33■□□□□ 0.21
NPHP4-211ENST00000622020 MAN1C1Q9NR34 630 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 ASNSD1Q9NWL6 643 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.21
NPHP4-211ENST00000622020 C1QAP02745 245 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 UBA1P22314 1058 aaKnown RBP16.33■□□□□ 0.2
NPHP4-211ENST00000622020 ATXN3P54252 364 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-211ENST00000622020 ACTR3P61158 418 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 IGBP1P78318 339 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 ROR2Q01974 943 aaKnown RBP16.33■□□□□ 0.2
NPHP4-211ENST00000622020 ASPHQ12797 758 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 PPM1JQ5JR12 505 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 SCUBE3Q8IX30 993 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 NIM1KQ8IY84 436 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 CDHR1Q96JP9 859 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 RNF157Q96PX1 679 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 CCDC106Q9BWC9 280 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 PNPOQ9NVS9 261 aa16.33■□□□□ 0.2
NPHP4-211ENST00000622020 CPSF3Q9UKF6 684 aaKnown RBP16.33■□□□□ 0.2
NPHP4-211ENST00000622020 A8MXQ7 604 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 APOEP02649 317 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 GSTT1P30711 240 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 CDH5P33151 784 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-211ENST00000622020 SERPINB6P35237 376 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 SESN2P58004 480 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-211ENST00000622020 GBE1Q04446 702 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 LGSNQ5TDP6 509 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MAP1SQ66K74 1059 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-211ENST00000622020 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 FAM183BPQ6ZVS7 135 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 LPIN3Q9BQK8 851 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 B3GNT5Q9BYG0 378 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MMADHCQ9H3L0 296 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ACAD9Q9H845 621 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ZNF358Q9NW07 568 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 SIX4Q9UIU6 781 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 EFR3BQ9Y2G0 817 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ANKRD33BA6NCL7 494 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MED7O43513 233 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 KRT38O76015 456 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 MSX2P35548 267 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ABCG1P45844 678 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 RAP1GDS1P52306 607 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 GTF2A2P52657 109 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 HIC1Q14526 733 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 TEX44Q53QW1 395 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ANGEL2Q5VTE6 544 aaKnown RBP16.32■□□□□ 0.2
NPHP4-211ENST00000622020 ATG14Q6ZNE5 492 aa16.32■□□□□ 0.2
NPHP4-211ENST00000622020 HACE1Q8IYU2 909 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms