RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 NEDD8-MDP1E9PL57 170 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 SGK1O00141 431 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 TRIM24O15164 1050 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 STC2O76061 302 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 HMBSP08397 361 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 ATXN1P54253 815 aaKnown RBP21.54■■□□□ 1.04
SMC6-210ENST00000621152 YWHAGP61981 247 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMC6-210ENST00000621152 PLK5Q496M5 336 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 HSF5Q4G112 596 aaPredicted RBP21.54■■□□□ 1.04
SMC6-210ENST00000621152 USP39Q53GS9 565 aaKnown RBP21.54■■□□□ 1.04
SMC6-210ENST00000621152 EOGTQ5NDL2 527 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 ANO7Q6IWH7 933 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 TMEM270Q6UE05 265 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 PPM1KQ8N3J5 372 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 UBR7Q8N806 425 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 EHBP1Q8NDI1 1231 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 XPO6Q96QU8 1125 aaKnown RBP21.54■■□□□ 1.04
SMC6-210ENST00000621152 LRRC4Q9HBW1 653 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 DNAJC17Q9NVM6 304 aaKnown RBP21.54■■□□□ 1.04
SMC6-210ENST00000621152 CDV3Q9UKY7 258 aaKnown RBP21.54■■□□□ 1.04
SMC6-210ENST00000621152 MYOFQ9NZM1 2061 aa21.54■■□□□ 1.04
SMC6-210ENST00000621152 XPO1O14980 1071 aaKnown RBP21.53■■□□□ 1.04
SMC6-210ENST00000621152 P4HA2O15460 535 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 ALDH1A2O94788 518 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 GNA14O95837 355 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 ZBED1O96006 694 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 KLKB1P03952 638 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 TYRP14679 529 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 HNRNPLP14866 589 aaKnown RBP eCLIP21.53■■□□□ 1.04
SMC6-210ENST00000621152 BCAT1P54687 386 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 PAK1Q13153 545 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 CCDC6Q16204 474 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 CAMK4Q16566 473 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 PM20D1Q6GTS8 502 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 GRAMD4Q6IC98 578 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 PRR23CQ6ZRP0 262 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 RSRC2Q7L4I2 434 aaKnown RBP21.53■■□□□ 1.04
SMC6-210ENST00000621152 LMO3Q8TAP4 145 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 TPSD1Q9BZJ3 242 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 ULBP1Q9BZM6 244 aa21.53■■□□□ 1.04
SMC6-210ENST00000621152 DUSP15Q9H1R2 295 aaPredicted RBP21.53■■□□□ 1.04
SMC6-210ENST00000621152 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.52■■□□□ 1.04
SMC6-210ENST00000621152 RNF225M0QZC1 329 aaPredicted RBP21.52■■□□□ 1.04
SMC6-210ENST00000621152 RHOBTB1O94844 696 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 CHRM1P11229 460 aaPredicted RBP21.52■■□□□ 1.04
SMC6-210ENST00000621152 UBE2HP62256 183 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 BST2Q10589 180 aaKnown RBP21.52■■□□□ 1.04
SMC6-210ENST00000621152 KCNH2Q12809 1159 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 C10orf76Q5T2E6 689 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 Q6ZNB5 142 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 RRAGAQ7L523 313 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 RASSF3Q86WH2 238 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 TERB1Q8NA31 727 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 KCNV2Q8TDN2 545 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 TFAP2BQ92481 460 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 KAT5Q92993 513 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 BHMTQ93088 406 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 CNOT6LQ96LI5 555 aaKnown RBP21.52■■□□□ 1.04
SMC6-210ENST00000621152 POLMQ9NP87 494 aaPredicted RBP21.52■■□□□ 1.04
SMC6-210ENST00000621152 MARK1Q9P0L2 795 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 MARCH2Q9P0N8 246 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 STRIP2Q9ULQ0 834 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 ZNF510Q9Y2H8 683 aa21.52■■□□□ 1.04
SMC6-210ENST00000621152 SLC12A8A0AV02 714 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 O00370 1275 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 ADAM23O75077 832 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 EPN2O95208 641 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 FGFR1OPO95684 399 aaKnown RBP21.51■■□□□ 1.03
SMC6-210ENST00000621152 PAEPP09466 180 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 GBP1P32455 592 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 ELF2Q15723 593 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 LCLAT1Q6UWP7 414 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 TRIM59Q8IWR1 403 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 ZNF513Q8N8E2 541 aaPredicted RBP21.51■■□□□ 1.03
SMC6-210ENST00000621152 MDGA1Q8NFP4 955 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 IPO9Q96P70 1041 aaKnown RBP21.51■■□□□ 1.03
SMC6-210ENST00000621152 DCLK3Q9C098 648 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 PLK2Q9NYY3 685 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 CHMP5Q9NZZ3 219 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 KIAA1468Q9P260 1216 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMC6-210ENST00000621152 WDR87Q6ZQQ6 2873 aa21.51■■□□□ 1.03
SMC6-210ENST00000621152 SPTBN4Q9H254 2564 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 DCDC2BA2VCK2 349 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 CACNG3O60359 315 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 FOXD2O60548 495 aaPredicted RBP21.5■■□□□ 1.03
SMC6-210ENST00000621152 ZNF806P0C7X5 589 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 ADIGQ0VDE8 80 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 SF3A2Q15428 464 aaKnown RBP21.5■■□□□ 1.03
SMC6-210ENST00000621152 CNGA2Q16280 664 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 CREBRFQ8IUR6 639 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 PGBD3Q8N328 593 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 TRIML1Q8N9V2 468 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 KCTD13Q8WZ19 329 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 RTKNQ9BST9 563 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 BCCIPQ9P287 314 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMC6-210ENST00000621152 HCN2Q9UL51 889 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 STARD13Q9Y3M8 1113 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 FRYLO94915 3013 aa21.5■■□□□ 1.03
SMC6-210ENST00000621152 GDF9O60383 454 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms