RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 AP4E1Q9UPM8 1137 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 WDR27A2RRH5 827 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 GRK2P25098 689 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 CAPSQ13938 189 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 PDK1Q15118 436 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 SIX1Q15475 284 aaPredicted RBP12.71□□□□□ -0.37
SPCS1-206ENST00000619898 ITPRIPL1Q6GPH6 555 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 KLC3Q6P597 504 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 RHBDF2Q6PJF5 856 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 CHST13Q8NET6 341 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
SPCS1-206ENST00000619898 VPS39Q96JC1 886 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 DPP3Q9NY33 737 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 HACL1Q9UJ83 578 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
SPCS1-206ENST00000619898 CHADO15335 359 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 DHX15O43143 795 aaKnown RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 AP1G2O75843 785 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 FDFT1P37268 417 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 HIRAP54198 1017 aaPredicted RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 GDF10P55107 478 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 TPI1P60174 286 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 TCEAL1Q15170 157 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 C1orf220Q5T0J3 134 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 RNF220Q5VTB9 566 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 ISLR2Q6UXK2 745 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 TTC7BQ86TV6 843 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 PDZD8Q8NEN9 1154 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 DDX1Q92499 740 aaKnown RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 CNBD2Q96M20 576 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 PHACTR1Q9C0D0 580 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 MMADHCQ9H3L0 296 aaPredicted RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 XPNPEP1Q9NQW7 623 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 ETNK2Q9NVF9 386 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 TRDMT1O14717 391 aaKnown RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 DCXO43602 365 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 AHCYL1O43865 530 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 GAS2O43903 313 aaKnown RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 SERPINE1P05121 402 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 CD48P09326 243 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 ANPEPP15144 967 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 CNTFP26441 200 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 UBAP2LQ14157 1087 aaKnown RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 CES3Q6UWW8 571 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 PIWIL2Q8TC59 973 aaKnown RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 SLC44A1Q8WWI5 657 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 APBB2Q92870 758 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 CLPTM1LQ96KA5 538 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 SYT11Q9BT88 431 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 ILKAPQ9H0C8 392 aaPredicted RBP12.71□□□□□ -0.38
SPCS1-206ENST00000619898 WDR70Q9NW82 654 aa12.71□□□□□ -0.38
SPCS1-206ENST00000619898 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 HBP1O60381 514 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 TRUB2O95900 331 aaKnown RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 TGM2P21980 687 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 KLRC2P26717 231 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 CRADDP78560 199 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 KCNT2Q6UVM3 1135 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 SCUBE3Q8IX30 993 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 GDPD5Q8WTR4 605 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 JADE3Q92613 823 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 NENFQ9UMX5 172 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 SNCAIPQ9Y6H5 919 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 RNF103-CHMP3A0A140T963 221 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 PRR5-ARHGAP8B1AHC4 643 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 ARHGAP8P85298 464 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 GALNTL6Q49A17 601 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 IYDQ6PHW0 289 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 KDELC2Q7Z4H8 507 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 MFN1Q8IWA4 741 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 ULK2Q8IYT8 1036 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 COLGALT1Q8NBJ5 622 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 USP33Q8TEY7 942 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 HERPUD2Q9BSE4 406 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 FSD1LQ9BXM9 530 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 CCDC68Q9H2F9 335 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 CYP3A43Q9HB55 503 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 TAS2R1Q9NYW7 299 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 IPO11Q9UI26 975 aaKnown RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 KAT6AQ92794 2004 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 EEF2KO00418 725 aaKnown RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 TSHRP16473 764 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 ACAP1Q15027 740 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 LRRC8EQ6NSJ5 796 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 DRICH1Q6PGQ1 229 aaPredicted RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 RBM15BQ8NDT2 890 aaKnown RBP12.7□□□□□ -0.38
SPCS1-206ENST00000619898 SGF29Q96ES7 293 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 DTNBP1Q96EV8 351 aa12.7□□□□□ -0.38
SPCS1-206ENST00000619898 RNF157Q96PX1 679 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms