RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 EIF3HO15372 352 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 MDH1P40925 334 aaKnown RBP18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 DAOAP59103 153 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 AUHQ13825 339 aaKnown RBP18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 CROCCP2Q86T23 111 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 LRRN4Q8WUT4 740 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZNF296Q8WUU4 475 aaPredicted RBP18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 UROC1Q96N76 676 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 NPY6RQ99463 290 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 TMPRSS4Q9NRS4 437 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 TMLHEQ9NVH6 421 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLC12A6Q9UHW9 1150 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 NAALADL1Q9UQQ1 740 aa18.04■□□□□ 0.48
PCDHGC3-205ENST00000617641 YJEFN3A6XGL0 299 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZNF487B1APH4 448 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 HHLA1C9JL84 531 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 E7ENQ6 273 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 FBXO21O94952 628 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 MAP2K2P36507 400 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZSCAN26Q16670 478 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 INTS6LQ5JSJ4 861 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 CLLU1OSQ5K130 101 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 GLB1LQ6UWU2 654 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 SLC24A5Q71RS6 500 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 PCGF5Q86SE9 256 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 PPIL6Q8IXY8 311 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 OR10T2Q8NGX3 314 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 NT5C3BQ969T7 300 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ACBD6Q9BR61 282 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ROPN1BQ9BZX4 212 aaPredicted RBP18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ROPN1Q9HAT0 212 aaPredicted RBP18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 POPDC2Q9HBU9 364 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 FZD10Q9ULW2 581 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 TCRBV7S3A2A0A539 114 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 M0QYT0 321 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ARVCFO00192 962 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 INPPL1O15357 1258 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 FKTNO75072 461 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 BANF1O75531 89 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 FYNP06241 537 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 USP17L7P0C7H9 530 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 BDNFP23560 247 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 NME3Q13232 169 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 RAB41Q5JT25 222 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 FAM171BQ6P995 826 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 DCLRE1AQ6PJP8 1040 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 CEP128Q6ZU80 1094 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 ZNF280BQ86YH2 543 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 CSPG4P5Q96PW8 444 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 USP29Q9HBJ7 922 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 CWC15Q9P013 229 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 STAP1Q9ULZ2 295 aa18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-205ENST00000617641 NDC80O14777 642 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 DDHD2O94830 711 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 AGTP01019 485 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 STIP1P31948 543 aaKnown RBP18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 HTRA3P83110 453 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 OVOS1Q6IE37 1185 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 MFSD5Q6N075 450 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 BNIPLQ7Z465 357 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 NAT8LQ8N9F0 302 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 SUSD3Q96L08 255 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 DSEQ9UL01 958 aa18.02■□□□□ 0.48
PCDHGC3-205ENST00000617641 KCNN4O15554 427 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 EOMESO95936 686 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 GOT1P17174 413 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 RBL1P28749 1068 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 RDXP35241 583 aaKnown RBP18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 BASP1P80723 227 aaKnown RBP18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 GBE1Q04446 702 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 LRRTM3Q86VH5 581 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CCDC33Q8N5R6 958 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 PKMYT1Q99640 499 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CSNK1G1Q9HCP0 422 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CNGB3Q9NQW8 809 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CTNNAL1Q9UBT7 734 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 MFHAS1Q9Y4C4 1052 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 A6NNZ2 444 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CAPN9O14815 690 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 TMEM63AO94886 807 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 AMPD1P23109 780 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 LSP1P33241 339 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 DEUP1Q05D60 604 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 SLC10A2Q12908 348 aaPredicted RBP18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 PDIA2Q13087 525 aaKnown RBP18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 HIF1AQ16665 826 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 TUBB8Q3ZCM7 444 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CCDC38Q502W7 563 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 CENPUQ71F23 418 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 ZBED8Q8IZ13 594 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 SLC7A14Q8TBB6 771 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 SH3TC2Q8TF17 1288 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 SERPINB12Q96P63 405 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 PIGVQ9NUD9 493 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 ETNK2Q9NVF9 386 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 USP3Q9Y6I4 520 aa18.01■□□□□ 0.47
PCDHGC3-205ENST00000617641 KBTBD13C9JR72 458 aa18■□□□□ 0.47
PCDHGC3-205ENST00000617641 ZBED1O96006 694 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms