RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 PRPSAP2O60256 369 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 GRAP2O75791 330 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 TCF4P15884 667 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 GBP1P32455 592 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 HTR7P34969 479 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 SULT1E1P49888 294 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 CLCN4P51793 760 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ARPP19P56211 112 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 USP46P62068 366 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 PPP2R5DQ14738 602 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 DCAF6Q58WW2 860 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ERMARDQ5T6L9 678 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 SYPL2Q5VXT5 272 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ITIH5Q86UX2 942 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 SEPT5Q99719 369 aaPredicted RBP12.24□□□□□ -0.45
PDPN-211ENST00000617617 CARD6Q9BX69 1037 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 ARHGEF38Q9NXL2 777 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 CALCOCO1Q9P1Z2 691 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 FZD10Q9ULW2 581 aa12.24□□□□□ -0.45
PDPN-211ENST00000617617 TGM5O43548 720 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CA3P07451 260 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 KDELR1P24390 212 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CXCR5P32302 372 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CETN2P41208 172 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CDKN2BP42772 138 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 RNASE9P60153 205 aaKnown RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 SMAD3P84022 425 aaKnown RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 SIX1Q15475 284 aaPredicted RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 SPOCD1Q6ZMY3 1216 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 SPATA4Q8NEY3 305 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 FAM149B1Q96BN6 582 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 RUNDC3BQ96NL0 473 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 PLEKHA4Q9H4M7 779 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 NMUR1Q9HB89 426 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 HOMER3Q9NSC5 361 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
PDPN-211ENST00000617617 USTQ9Y2C2 406 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 C2CD2LO14523 706 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CEP104O60308 925 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 IGLV3-27P01718 113 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 RARAP10276 462 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 HCAR3P49019 387 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 GLE1Q53GS7 698 aaKnown RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 TFDP3Q5H9I0 405 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 SH3PXD2AQ5TCZ1 1133 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CCDC181Q5TID7 509 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 BTBD8Q5XKL5 378 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 DRICH1Q6PGQ1 229 aaPredicted RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
PDPN-211ENST00000617617 ZNF670Q9BS34 389 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 PBX4Q9BYU1 374 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 MSRAQ9UJ68 235 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 CHD5Q8TDI0 1954 aa12.23□□□□□ -0.45
PDPN-211ENST00000617617 hCG_1818297A0A087WSY0 165 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.22□□□□□ -0.45
PDPN-211ENST00000617617 A0A1W2PQH9 124 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 IRAK2O43187 625 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 FGF19O95750 216 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 NCAM1P13591 858 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 TFE3P19532 575 aaPredicted RBP12.22□□□□□ -0.45
PDPN-211ENST00000617617 KPNA1P52294 538 aaPredicted RBP12.22□□□□□ -0.45
PDPN-211ENST00000617617 EPHB3P54753 998 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 EPHA5P54756 1037 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 RING1Q06587 406 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 VEPH1Q14D04 833 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 TXNRD3NBQ6F5E7 133 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 SLCO2A1Q92959 643 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 FBXO32Q969P5 355 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 SLC39A13Q96H72 371 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 OSBPL2Q9H1P3 480 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 ENTPD7Q9NQZ7 604 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 GMIPQ9P107 970 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 DPP7Q9UHL4 492 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 TLR6Q9Y2C9 796 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 KIF26AQ9ULI4 1882 aaPredicted RBP12.22□□□□□ -0.45
PDPN-211ENST00000617617 H0YGN5 161 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 M0QYT0 321 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 CAPN9O14815 690 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 RALAP11233 206 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 MYOGP15173 224 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 ELF1P32519 619 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 DEUP1Q05D60 604 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 SEMA3BQ13214 749 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 TAC4Q86UU9 113 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 MAP7D3Q8IWC1 876 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 MS4A14Q96JA4 679 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 HAPLN3Q96S86 360 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 LRRC3Q9BY71 257 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 SLITRK6Q9H5Y7 841 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 ALG13Q9NP73 1137 aaKnown RBP12.22□□□□□ -0.45
PDPN-211ENST00000617617 PIGVQ9NUD9 493 aa12.22□□□□□ -0.45
PDPN-211ENST00000617617 A0A1W2PPC1 479 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms