RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 WDR4P57081 412 aaKnown RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 KLF1Q13351 362 aaPredicted RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 PKN2Q16513 984 aaKnown RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 FOXB2Q5VYV0 432 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 FAM117BQ6P1L5 589 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 MAMDC4Q6UXC1 1216 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 C3orf62Q6ZUJ4 267 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CCDC110Q8TBZ0 833 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 SERPINB12Q96P63 405 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 ZFP69BQ9UJL9 534 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CFAP69A5D8W1 941 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 HMGCRP04035 888 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 GPD2P43304 727 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 RASSF2P50749 326 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CCNG1P51959 295 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 MSS51Q4VC12 460 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 MFSD5Q6N075 450 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 MTDHQ86UE4 582 aaKnown RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.03■□□□□ -0
SHROOM1-208ENST00000617339 CCNYQ8ND76 341 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 ROPN1BQ9BZX4 212 aaPredicted RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 ROPN1Q9HAT0 212 aaPredicted RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 BARX2Q9UMQ3 279 aaPredicted RBP15.03■□□□□ -0
SHROOM1-208ENST00000617339 MFHAS1Q9Y4C4 1052 aa15.03■□□□□ -0
SHROOM1-208ENST00000617339 CEP290O15078 2479 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 MCF2LO15068 1137 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 WFS1O76024 890 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 IL18RAPO95256 599 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 CA4P22748 312 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 SDC4P31431 198 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 NDUFV1P49821 464 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 SLC26A2P50443 739 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 CRADDP78560 199 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 KPNB1Q14974 876 aaKnown RBP15.02■□□□□ -0
SHROOM1-208ENST00000617339 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 NME8Q8N427 588 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 SLC7A6OSQ96CW6 309 aaPredicted RBP15.02■□□□□ -0
SHROOM1-208ENST00000617339 UBE2OQ9C0C9 1292 aaKnown RBP15.02■□□□□ -0
SHROOM1-208ENST00000617339 OCEL1Q9H607 264 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.02■□□□□ -06e-6■■□□□ 12.8
SHROOM1-208ENST00000617339 RLFQ13129 1914 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 PSME4Q14997 1843 aa15.02■□□□□ -0
SHROOM1-208ENST00000617339 CASTOR2A6NHX0 329 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 SIGLEC16A6NMB1 481 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 STRNO43815 780 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 MCF2P10911 925 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 GNL1P36915 607 aaPredicted RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 THPOP40225 353 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 DRG2P55039 364 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 PTK6Q13882 451 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 CYP1B1Q16678 543 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 SLC5A9Q2M3M2 681 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 DUSP28Q4G0W2 176 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 SPOUT1Q5T280 376 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 TRNP1Q6NT89 227 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 TRMT10CQ7L0Y3 403 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 TTC30AQ86WT1 665 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 STKLD1Q8NE28 680 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 FAF2Q96CS3 445 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 XPO7Q9UIA9 1087 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 GJD2Q9UKL4 321 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 STRIP2Q9ULQ0 834 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 HOXA11P31270 313 aaPredicted RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 SCNN1BP51168 640 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 ATN1P54259 1190 aaPredicted RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 PITX1P78337 314 aaPredicted RBP15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 DCAF6Q58WW2 860 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 FNBP1LQ5T0N5 605 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 VCPIP1Q96JH7 1222 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 ZIC5Q96T25 663 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 WHRNQ9P202 907 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 STOML1Q9UBI4 398 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 NUDT5Q9UKK9 219 aa15.02□□□□□ -0.01
SHROOM1-208ENST00000617339 SPTLC1O15269 473 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 T-ENOLP0DO92 83 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 PYGBP11216 843 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 SKIP12755 728 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 ACADSP16219 412 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 GPD1P21695 349 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 PROZP22891 400 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 RPL22P35268 128 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 VHLP40337 213 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 CPA2P48052 419 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 VCPP55072 806 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 BCAR1P56945 870 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 HTRA3P83110 453 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 RGMBQ6NW40 437 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 RSPH3Q86UC2 560 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 MCUR1Q96AQ8 359 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 CYTH2Q99418 400 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 A0A0G2JND7 137 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 GAS2O43903 313 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 HIF1AQ16665 826 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 VPS52Q8N1B4 723 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 DRAXINQ8NBI3 349 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 STMN2Q93045 179 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 ZNF333Q96JL9 665 aa15.01□□□□□ -0.01
SHROOM1-208ENST00000617339 TMEM109Q9BVC6 243 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms