RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SOX11P35716 441 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 DLGAP5Q15398 846 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 UGT2A3Q6UWM9 527 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 ENOSF1Q7L5Y1 443 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 SNX32Q86XE0 403 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 RTKN2Q8IZC4 609 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 UNC5BQ8IZJ1 945 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 METTL25Q8N6Q8 603 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 NAT8LQ8N9F0 302 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 NCSTNQ92542 709 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 JADE3Q92613 823 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 MOCOSQ96EN8 888 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 ZNF668Q96K58 619 aaPredicted RBP6.9□□□□□ -1.31
LMO3-235ENST00000616247 CCDC106Q9BWC9 280 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 NUF2Q9BZD4 464 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 ARMC7Q9H6L4 198 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 SELENONQ9NZV5 590 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 PI4KBQ9UBF8 816 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 DMTF1Q9Y222 760 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 DRG1Q9Y295 367 aaKnown RBP6.9□□□□□ -1.31
LMO3-235ENST00000616247 PCDHGA4Q9Y5G9 962 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 STX16-NPEPL1H3BU86 382 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 BPGMP07738 259 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TYK2P29597 1187 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 SLC5A2P31639 672 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ETFBP38117 255 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ESRRGP62508 458 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TRPC3Q13507 836 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 SEPT6Q14141 434 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 MYBPC2Q14324 1141 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 UGCGQ16739 394 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 MTERF2Q49AM1 385 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 HSF5Q4G112 596 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 CES3Q6UWW8 571 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TNS4Q8IZW8 715 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 TSPAN14Q8NG11 270 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 GAB3Q8WWW8 586 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 WDR83Q9BRX9 315 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 SSU72Q9NP77 194 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NGRNQ9NPE2 291 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 C20orf96Q9NUD7 363 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 RBAKQ9NYW8 714 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 KCND2Q9NZV8 630 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TJP2Q9UDY2 1190 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 SEPT9Q9UHD8 586 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 CCPG1Q9ULG6 757 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 MRPL11Q9Y3B7 192 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 ARHGEF37A1IGU5 675 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CCDC78A2IDD5 438 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TMEM191CA6NGB0 347 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TPST1O60507 370 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 DNAJA2O60884 412 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CALB1P05937 261 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TMEM191BP0C7N4 346 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CSH1P0DML2 217 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CSH2P0DML3 217 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ITGB5P18084 799 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 RPL10P27635 214 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 TMED10P49755 219 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NLRP11P59045 1033 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 TFAMQ00059 246 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 GCNT1Q02742 428 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 MTMR1Q13613 665 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 WDR78Q5VTH9 848 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CES4AQ5XG92 561 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 PLEKHA7Q6IQ23 1121 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TATDN1Q6P1N9 297 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 LAYNQ6UX15 382 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TRIM72Q6ZMU5 477 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 TMEM179Q6ZVK1 233 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 MYO1HQ8N1T3 1032 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 FBXW8Q8N3Y1 598 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CERS5Q8N5B7 392 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ZBTB8BQ8NAP8 495 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NETO2Q8NC67 525 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 IL31RAQ8NI17 732 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 JOSD2Q8TAC2 188 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 DIS3LQ8TF46 1054 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 ZNF516Q92618 1163 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 NKD2Q969F2 451 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 ZFRQ96KR1 1074 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 C7orf26Q96N11 449 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 SERPINI1Q99574 410 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 WDR55Q9H6Y2 383 aaPredicted RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 TDRD3Q9H7E2 651 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 DDX56Q9NY93 547 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 NYAP2Q9P242 653 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 SSX2IPQ9Y2D8 614 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 RBMX2Q9Y388 322 aaKnown RBP6.89□□□□□ -1.31
LMO3-235ENST00000616247 TSC22D4Q9Y3Q8 395 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 SNX13Q9Y5W8 968 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ATP9BO43861 1147 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 AMHP03971 560 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 KRT7P08729 469 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 COX4I1P13073 169 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 ITGAXP20702 1163 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 CRKP46108 304 aa6.89□□□□□ -1.31
LMO3-235ENST00000616247 NR1H2P55055 460 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms