RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SLC47A2Q86VL8 602 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 SEPT8Q92599 483 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 KIF12Q96FN5 646 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 SNX27Q96L92 541 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 TRAIPQ9BWF2 469 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 CXCL16Q9H2A7 254 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 RNF19AQ9NV58 838 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 RAB20Q9NX57 234 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 HSFX1Q9UBD0 423 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 TBC1D30Q9Y2I9 924 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 PCDHA3Q9Y5H8 950 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.6□□□□□ -0.23
FOXN3-219ENST00000615335 TANC1Q9C0D5 1861 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 MAP3K7O43318 606 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
FOXN3-219ENST00000615335 FMO1Q01740 532 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 P3H1Q32P28 736 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 GLRA4Q5JXX5 417 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 SPDYAQ5MJ70 313 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 C15orf39Q6ZRI6 1047 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 MARK2Q7KZI7 788 aaKnown RBP13.6□□□□□ -0.23
FOXN3-219ENST00000615335 UBE2Q1Q7Z7E8 422 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
FOXN3-219ENST00000615335 NAT14Q8WUY8 206 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 SHC3Q92529 594 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 LPPQ93052 612 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 BTBD6Q96KE9 485 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
FOXN3-219ENST00000615335 SMIM31A0A1B0GVY4 71 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 TCRBV7S2A1N4TA0A589 114 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 MEIS3P2A8K0S8 358 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 H0Y3Z8 333 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 SUPT3HO75486 399 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 PABPC4LP0CB38 370 aaKnown RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 RAG1P15918 1043 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 PIK3CAP42336 1068 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 PLOD1Q02809 727 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 AP1B1Q10567 949 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ITGA9Q13797 1035 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ALKAL1Q6UXT8 129 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 VSIG1Q86XK7 387 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ST13P4Q8IZP2 240 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 UHMK1Q8TAS1 419 aaKnown RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 SEMA4DQ92854 862 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ARPC5LQ9BPX5 153 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ACP6Q9NPH0 428 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ETNK2Q9NVF9 386 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 UVRAGQ9P2Y5 699 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 GTF3C4Q9UKN8 822 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 TRIM43BA6NCK2 446 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 TRAFD1O14545 582 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ZNF623O75123 536 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 CYP1A1P04798 512 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 KRT19P08727 400 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 RARGP13631 454 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 SERPINB8P50452 374 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 IFI35P80217 286 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ADCY1Q08828 1119 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 LRRC74BQ6ZQY2 392 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 SLC24A5Q71RS6 500 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 SPATA24Q86W54 205 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 CPNE8Q86YQ8 564 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 MAP7D3Q8IWC1 876 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ARL10Q8N8L6 244 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 APBB2Q92870 758 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ART4Q93070 314 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ZMAT2Q96NC0 199 aaKnown RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 ZNF184Q99676 751 aaPredicted RBP13.59□□□□□ -0.23
FOXN3-219ENST00000615335 CNTN3Q9P232 1028 aa13.59□□□□□ -0.23
FOXN3-219ENST00000615335 RIPK2O43353 540 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 VNN1O95497 513 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 TIMP1P01033 207 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 CST3P01034 146 aaPredicted RBP13.58□□□□□ -0.24
FOXN3-219ENST00000615335 HLA-DRAP01903 254 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 VAV1P15498 845 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 CYP11B1P15538 503 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 ADARP55265 1226 aaKnown RBP13.58□□□□□ -0.24
FOXN3-219ENST00000615335 CDR2Q01850 454 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 SLC34A1Q06495 639 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 TRPC3Q13507 836 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 NCOA4Q13772 614 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 SIX1Q15475 284 aaPredicted RBP13.58□□□□□ -0.24
FOXN3-219ENST00000615335 TNFAIP8L3Q5GJ75 292 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 MRPL10Q7Z7H8 261 aaKnown RBP13.58□□□□□ -0.24
FOXN3-219ENST00000615335 NT5DC4Q86YG4 428 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 ELMO3Q96BJ8 720 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 PGBD4Q96DM1 585 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 TUBGCP5Q96RT8 1024 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 PI4K2AQ9BTU6 479 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 TBC1D10AQ9BXI6 508 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 EPB41L1Q9H4G0 881 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 PTTG2Q9NZH5 202 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 SMIM28A0A1B0GU29 152 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 TMEM247A6NEH6 219 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 RASGRF2O14827 1237 aa13.58□□□□□ -0.24
FOXN3-219ENST00000615335 CXCL10P02778 98 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms