RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 KCNA5P22460 613 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 GBP1P32455 592 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 ARHGAP25P42331 645 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 ZNF143P52747 638 aaPredicted RBP15.36■□□□□ 0.05
CD48-203ENST00000613788 HADHBP55084 474 aaKnown RBP15.36■□□□□ 0.05
CD48-203ENST00000613788 CYP4F8P98187 520 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 TEAD2Q15562 447 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 SLC5A9Q2M3M2 681 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 SLC25A52Q3SY17 297 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 ARHGAP29Q52LW3 1261 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 GPR158Q5T848 1215 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 SYPL2Q5VXT5 272 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 TXNDC8Q6A555 127 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 RNF10Q8N5U6 811 aaKnown RBP15.36■□□□□ 0.05
CD48-203ENST00000613788 CNPY3Q9BT09 278 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 TASP1Q9H6P5 420 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 CCSER2Q9H7U1 834 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 TRPC7Q9HCX4 862 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 OSGEPQ9NPF4 335 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 IP6K2Q9UHH9 426 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 DNMT3LQ9UJW3 386 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 DUSP10Q9Y6W6 482 aa15.36■□□□□ 0.05
CD48-203ENST00000613788 TRAV19A0A0A6YYK7 116 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 C2orf78A6NCI8 922 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 H3BQ06 376 aaPredicted RBP15.35■□□□□ 0.05
CD48-203ENST00000613788 COCHO43405 550 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 MOSPD3O75425 235 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 PTPN9P43378 593 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 PIGHQ14442 188 aaPredicted RBP15.35■□□□□ 0.05
CD48-203ENST00000613788 ACAP1Q15027 740 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 CLUL1Q15846 466 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 MSANTD2Q6P1R3 559 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 MAB21L3Q8N8X9 362 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 ITFG1Q8TB96 612 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 NT5C3BQ969T7 300 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 CFAP57Q96MR6 1250 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 NPY6RQ99463 290 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 NCAPGQ9BPX3 1015 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 SLITRK6Q9H5Y7 841 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 NUDT5Q9UKK9 219 aa15.35■□□□□ 0.05
CD48-203ENST00000613788 GOLGA6L9A6NEM1 432 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 M0QYT0 321 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 DPYSL4O14531 572 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 TBX18O95935 607 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 F9P00740 461 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 PSMA2P25787 234 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 SULT1E1P49888 294 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 KPNA1P52294 538 aaPredicted RBP15.34■□□□□ 0.05
CD48-203ENST00000613788 EFEMP1Q12805 493 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 CCDC14Q49A88 953 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 ARL14EPQ8N8R7 260 aaPredicted RBP15.34■□□□□ 0.05
CD48-203ENST00000613788 DQX1Q8TE96 717 aaKnown RBP15.34■□□□□ 0.05
CD48-203ENST00000613788 SLC46A2Q9BY10 475 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 SMOC2Q9H3U7 446 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 LZTFL1Q9NQ48 299 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
CD48-203ENST00000613788 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.05
CD48-203ENST00000613788 MARCH2Q9P0N8 246 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 GUCA1BQ9UMX6 200 aa15.34■□□□□ 0.05
CD48-203ENST00000613788 ZNF638Q14966 1978 aaKnown RBP15.34■□□□□ 0.05
CD48-203ENST00000613788 A0A0U1RQJ8 604 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 MACROD2A1Z1Q3 448 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 BUB1O43683 1085 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 RNF8O76064 485 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 OLFM2O95897 454 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 TRUB2O95900 331 aaKnown RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 CKMP06732 381 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 CEBPBP17676 345 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 DEKP35659 375 aaKnown RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 AVPR1AP37288 418 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 COG7P83436 770 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 ATP11AP98196 1134 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 SMAD4Q13485 552 aaKnown RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 CBX2Q14781 532 aaPredicted RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 TRNP1Q6NT89 227 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 GET4Q7L5D6 327 aaPredicted RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 STRADAQ7RTN6 431 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 REXO1L1PQ8IX06 675 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 CMTM8Q8IZV2 173 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 CCAR2Q8N163 923 aaKnown RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 MAFAQ8NHW3 353 aaPredicted RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 ATRIPQ8WXE1 791 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 ING5Q8WYH8 240 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 SUSD6Q92537 303 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 PGAP3Q96FM1 320 aaPredicted RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 SERPINB11Q96P15 392 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 TRIM7Q9C029 511 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 RNF38Q9H0F5 515 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 FAM204AQ9H8W3 233 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 GDE1Q9NZC3 331 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 SFMBT1Q9UHJ3 866 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 CDH22Q9UJ99 828 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 RASAL2Q9UJF2 1139 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 SALL4Q9UJQ4 1053 aa15.33■□□□□ 0.05
CD48-203ENST00000613788 USP15Q9Y4E8 981 aaPredicted RBP15.33■□□□□ 0.05
CD48-203ENST00000613788 PROSCO94903 275 aa15.33■□□□□ 0.04
CD48-203ENST00000613788 ENDOD1O94919 500 aa15.33■□□□□ 0.04
CD48-203ENST00000613788 MBL2P11226 248 aaPredicted RBP15.33■□□□□ 0.04
CD48-203ENST00000613788 SLC7A9P82251 487 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms