RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	DHPS	P49366	369 aa	Predicted RBP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	IRX4	P78413	519 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	LMAN2	Q12907	356 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	ST3GAL2	Q16842	350 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	EDRF1	Q3B7T1	1238 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	C10orf76	Q5T2E6	689 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	PSAPL1	Q6NUJ1	521 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	SLC23A3	Q6PIS1	610 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508		Q6ZNB5	142 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	TADA2B	Q86TJ2	420 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	FAM186B	Q8IYM0	893 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	RLN3	Q8WXF3	142 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	XPO6	Q96QU8	1125 aa	Known RBP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	GABRG3	Q99928	467 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	DUSP16	Q9BY84	665 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	UBXN6	Q9BZV1	441 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	NMUR1	Q9HB89	426 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	TMEM8A	Q9HCN3	771 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	DNAJC17	Q9NVM6	304 aa	Known RBP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	BCCIP	Q9P287	314 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	LSM7	Q9UK45	103 aa	Known RBP	11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	FBXO10	Q9UK96	956 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	PILRB	Q9UKJ0	227 aa		11.73	□□□□□ -0.53
CBWD1-222	ENST00000613508	THADA	Q6YHU6	1953 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508		A0A1W2PQH9	124 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	UPK3BL1	B0FP48	263 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	UPK3BL2	E5RIL1	263 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	GFRA2	O00451	464 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	TRIM24	O15164	1050 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	MAP3K13	O43283	966 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	KRT37	O76014	449 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	CISD3	P0C7P0	127 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	PRR29	P0C7W0	189 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	IRF1	P10914	325 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	RARG	P13631	454 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	HOXB2	P14652	356 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	KRT39	Q6A163	491 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	SLC36A4	Q6YBV0	504 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	KRBA2	Q6ZNG9	492 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	SCD5	Q86SK9	330 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	TTC30A	Q86WT1	665 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	MIB1	Q86YT6	1006 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	TMEFF1	Q8IYR6	380 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	FRMD1	Q8N878	549 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	CCDC150	Q8NCX0	1101 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	PIGK	Q92643	395 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	BBS2	Q9BXC9	721 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	ZDHHC4	Q9NPG8	344 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	WASF3	Q9UPY6	502 aa		11.72	□□□□□ -0.53
CBWD1-222	ENST00000613508	FREM2	Q5SZK8	3169 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	AKAP13	Q12802	2813 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	PRRT4	C9JH25	899 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	NEDD8-MDP1	E9PL57	170 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	AP5Z1	O43299	807 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	ZNF217	O75362	1048 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	STC2	O76061	302 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	PENK	P01210	267 aa	Predicted RBP	11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	NOVA1	P51513	510 aa	Known RBP	11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	ZNF132	P52740	706 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	ADAM9	Q13443	819 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	TRIM61	Q5EBN2	209 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	RAB41	Q5JT25	222 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	C10orf120	Q5SQS8	335 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	SH3PXD2A	Q5TCZ1	1133 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	LYSMD4	Q5XG99	296 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	EGFLAM	Q63HQ2	1017 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	SDE2	Q6IQ49	451 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	RABEPK	Q7Z6M1	372 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	FBXL13	Q8NEE6	735 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	CEP76	Q8TAP6	659 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	CHAMP1	Q96JM3	812 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	NUSAP1	Q9BXS6	441 aa	Known RBP	11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	TMEM74B	Q9NUR3	256 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	CALCOCO1	Q9P1Z2	691 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	NAGPA	Q9UK23	515 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	MAPK8IP1	Q9UQF2	711 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	ZNF510	Q9Y2H8	683 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	SLC27A6	Q9Y2P4	619 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	ATP6V1D	Q9Y5K8	247 aa		11.71	□□□□□ -0.53
CBWD1-222	ENST00000613508	MYO18A	Q92614	2054 aa	Known RBP	11.71	□□□□□ -0.54
CBWD1-222	ENST00000613508	DMXL2	Q8TDJ6	3036 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	GIPC1	O14908	333 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	NPC1	O15118	1278 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	STX10	O60499	249 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZNF202	O95125	648 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	KLKB1	P03952	638 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	RALA	P11233	206 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	CD58	P19256	250 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	ITPKA	P23677	461 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	CHKA	P35790	457 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	DGKG	P49619	791 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	RAD23B	P54727	409 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	COG7	P83436	770 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	ENPP2	Q13822	863 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms