RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 KPNA4O00629 521 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 GRIN3BO60391 1043 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 GLP2RO95838 553 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 GYS1P13807 737 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 EPC2Q52LR7 807 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ZNF720Q7Z2F6 126 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 STRA8Q7Z7C7 330 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ST13P5Q8NFI4 369 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 TMEM176AQ96HP8 235 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 WDR41Q9HAD4 459 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 SENP2Q9HC62 589 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 GGA3Q9NZ52 723 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 RABGEF1Q9UJ41 708 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CCL15-CCL14A0A0B4J2E2 113 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CHRNA5P30532 468 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 GRK3P35626 688 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CCL15Q16663 113 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CBWD2Q8IUF1 395 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 SVOPQ8N4V2 548 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 TDRD5Q8NAT2 981 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 TRIM63Q969Q1 353 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 PAPOLBQ9NRJ5 636 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 H0YC42 278 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 SKAP2O75563 359 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 NPM3O75607 178 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 PLEKP08567 350 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CACNA2D1P54289 1103 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ELAVL2Q12926 359 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 C1DQ13901 141 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 R3HDM1Q15032 1099 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CLEC10AQ8IUN9 316 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CATSPER2Q96P56 530 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 TSEN34Q9BSV6 310 aaKnown RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 STK39Q9UEW8 545 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ZFP1Q6P2D0 407 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 TMPRSS6Q8IU80 811 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 TRIM48Q8IWZ4 208 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 FBXO32Q969P5 355 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 OLFM1Q99784 485 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 ABI2Q9NYB9 513 aaPredicted RBP17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CAPN6Q9Y6Q1 641 aa17.9■□□□□ 0.46
HMGXB3-206ENST00000613459 CEMIPQ8WUJ3 1361 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 TMEM114B3SHH9 223 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 SERPINE1P05121 402 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 CRABP2P29373 138 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 CAP2P40123 477 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 GCLCP48506 637 aaPredicted RBP17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 NR2C2P49116 596 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 NPY2RP49146 381 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 GTF2A2P52657 109 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 ACAP1Q15027 740 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 ERAP2Q6P179 960 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 NT5DC4Q86YG4 428 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 MRPS31Q92665 395 aaKnown RBP17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 SEMA6BQ9H3T3 888 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 RGS18Q9NS28 235 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 TRHDEQ9UKU6 1024 aa17.89■□□□□ 0.46
HMGXB3-206ENST00000613459 CD44P16070 742 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 ZNF268Q14587 947 aaPredicted RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 SPANXN3Q5MJ09 141 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 C19orf18Q8NEA5 215 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 SGF29Q96ES7 293 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 MTMR12Q9C0I1 747 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 PPP2R3BQ9Y5P8 575 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 HACD1B0YJ81 288 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 ALDH7A1P49419 539 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 SARSP49591 514 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 FAM45BPQ6NSW5 357 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 OTOAQ7RTW8 1153 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 ABRAQ8N0Z2 381 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 NMD3Q96D46 503 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 ARMC7Q9H6L4 198 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 CYB561D2O14569 222 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 CDK7P50613 346 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 FCGRTP55899 365 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 TRIM25Q14258 630 aaKnown RBP17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 NIPA1Q7RTP0 329 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 LZTR1Q8N653 840 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 KYQ8NBH2 561 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 GLT1D1Q96MS3 346 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 AHSPQ9NZD4 102 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 LNPEPQ9UIQ6 1025 aa17.89■□□□□ 0.45
HMGXB3-206ENST00000613459 KRT6AP02538 564 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 KRT6BP04259 564 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 ACO1P21399 889 aaKnown RBP17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 KRT6CP48668 564 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 PTPN11Q06124 597 aaPredicted RBP17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 TLK2Q86UE8 772 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 PGBD3Q8N328 593 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 STARD8Q92502 1023 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 GINS4Q9BRT9 223 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 SPATA31A1Q5TZJ5 1347 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 C15orf38-AP3S2A0A0A6YYH1 394 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 MGAT4DA6NG13 374 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 UBDO15205 165 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 TPST1O60507 370 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 SLC34A1Q06495 639 aa17.88■□□□□ 0.45
HMGXB3-206ENST00000613459 TMEM62Q0P6H9 643 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms