RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 IL5RAQ01344 420 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CMPK2Q5EBM0 449 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 RIPOR1Q6ZS17 1223 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CDC26Q8NHZ8 85 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ALG13Q9NP73 1137 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 DDX39AO00148 427 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 UBDO15205 165 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 SQLEQ14534 574 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 SPDYE7PQ495Y7 208 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CASP12Q6UXS9 341 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 HM13Q8TCT9 377 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 PRCCQ92733 491 aaPredicted RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZC3H10Q96K80 434 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 C9orf72Q96LT7 481 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 SPAG4Q9NPE6 437 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 PCDHB2Q9Y5E7 798 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MAGEA2P43356 314 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CPA2P48052 419 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MAPKAPK5Q8IW41 473 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZC3H13Q5T200 1668 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 FOXO3O43524 673 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ATP6V1B2P21281 511 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CCNG2Q16589 344 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ACTRT2Q8TDY3 377 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 RNF25Q96BH1 459 aaPredicted RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 HES6Q96HZ4 224 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 LY9Q9HBG7 655 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MCUBQ9NWR8 336 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ANAPC2Q9UJX6 822 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 RPS6KA6Q9UK32 745 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ABCG2Q9UNQ0 655 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 PRMT3O60678 531 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ATG7O95352 703 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 LSM8O95777 96 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 GSSP48637 474 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 EIF5AP63241 154 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 ERICH5Q6P6B1 374 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZNF624Q9P2J8 865 aaPredicted RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 PCDHB8Q9UN66 801 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 IRAK3Q9Y616 596 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZMYM2Q9UBW7 1377 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 NEXMIFQ5QGS0 1516 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 NOL4O94818 638 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 GYS1P13807 737 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 GPD2P43304 727 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 GNG2P59768 71 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 TAF8Q7Z7C8 310 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ACOT12Q8WYK0 555 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 APOL2Q9BQE5 337 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CASS4Q9NQ75 786 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ABCB10Q9NRK6 738 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 TBC1D22BQ9NU19 505 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 WWP2O00308 870 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 TGDSO95455 350 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 PRELPP51888 382 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 LAYNQ6UX15 382 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ZNF507Q8TCN5 953 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 CAB39LQ9H9S4 337 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 INPP5FQ9Y2H2 1132 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 OR14I1A6ND48 311 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 DYNC1LI2O43237 492 aaPredicted RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 NTRK1P04629 796 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 RAB27AP51159 221 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 ATP6AP1LQ52LC2 224 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 BNIPLQ7Z465 357 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 UNC5CLQ8IV45 518 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MIER2Q8N344 545 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 SUPT20HQ8NEM7 779 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 C2orf40Q9H1Z8 148 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 SP140LQ9H930 580 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 NOD1Q9Y239 953 aa9.01□□□□□ -0.97
TTC28-208ENST00000612946 MYH14Q7Z406 1995 aaKnown RBP9.01□□□□□ -0.97
TTC28-208ENST00000612946 PDE8BO95263 885 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NPR2P20594 1047 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SP4Q02446 784 aa9□□□□□ -0.97
TTC28-208ENST00000612946 CNTN1Q12860 1018 aa9□□□□□ -0.97
TTC28-208ENST00000612946 IDI1Q13907 227 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ZNF280DQ6N043 979 aa9□□□□□ -0.97
TTC28-208ENST00000612946 GALNT6Q8NCL4 622 aa9□□□□□ -0.97
TTC28-208ENST00000612946 MAP3K14Q99558 947 aa9□□□□□ -0.97
TTC28-208ENST00000612946 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 BARHL2Q9NY43 387 aa9□□□□□ -0.97
TTC28-208ENST00000612946 BARX2Q9UMQ3 279 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 CLIC2O15247 247 aa9□□□□□ -0.97
TTC28-208ENST00000612946 NCAM2O15394 837 aa9□□□□□ -0.97
TTC28-208ENST00000612946 COMTP21964 271 aa9□□□□□ -0.97
TTC28-208ENST00000612946 HNMTP50135 292 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ST3GAL1Q11201 340 aa9□□□□□ -0.97
TTC28-208ENST00000612946 USP10Q14694 798 aaKnown RBP9□□□□□ -0.97
TTC28-208ENST00000612946 CACTIN-AS1Q8N1I8 211 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ZNF420Q8TAQ5 688 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 ZNF75CPQ92670 426 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 CCDC177Q9NQR7 707 aaPredicted RBP9□□□□□ -0.97
TTC28-208ENST00000612946 ITGA11Q9UKX5 1188 aa9□□□□□ -0.97
TTC28-208ENST00000612946 ALG6Q9Y672 507 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms