RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PSMA2P25787 234 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 SDC4P31431 198 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 GTF2F1P35269 517 aaKnown RBP eCLIP16.69■□□□□ 0.263e-8■■■■■ 161.7
CLTCL1-207ENST00000611723 ZNF252P-AS1Q0IIN9 211 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 MESDQ14696 234 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 COL19A1Q14993 1142 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 SLC25A52Q3SY17 297 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 SYPL2Q5VXT5 272 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 TMEM150AQ86TG1 271 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 LEMD2Q8NC56 503 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 ZNF707Q96C28 371 aaPredicted RBP16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 PGAP3Q96FM1 320 aaPredicted RBP16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 NCAPGQ9BPX3 1015 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 SFXN1Q9H9B4 322 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 TRPM5Q9NZQ8 1165 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 STAP1Q9ULZ2 295 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 ALG6Q9Y672 507 aa16.69■□□□□ 0.26
CLTCL1-207ENST00000611723 CCDC195A0A1B0GUA6 201 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 CAPN9O14815 690 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 TADA3O75528 432 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 GLP2RO95838 553 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 SRGAP2BP0DMP2 458 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 NCAM1P13591 858 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 RARGP13631 454 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 TUBP50607 506 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 EIF4EBP2Q13542 120 aaPredicted RBP16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 CTC1Q2NKJ3 1217 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 DCAF6Q58WW2 860 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 ZNF569Q5MCW4 686 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 MSANTD2Q6P1R3 559 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 STRADAQ7RTN6 431 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 DAAM2Q86T65 1068 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 HS6ST3Q8IZP7 471 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 ALS2CR12Q96Q35 445 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 CDK5RAP1Q96SZ6 601 aaKnown RBP16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 IGFLR1Q9H665 355 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 ASAH2Q9NR71 780 aa16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 DNMT3BQ9UBC3 853 aaKnown RBP16.68■□□□□ 0.26
CLTCL1-207ENST00000611723 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 IGLV3-25P01717 112 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 HOXB8P17481 243 aaPredicted RBP16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 PFKLP17858 780 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 CDC25CP30307 473 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 PCK1P35558 622 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 ETF1P62495 437 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 SKIV2LQ15477 1246 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 KLHDC10Q6PID8 442 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 GAREM2Q75VX8 874 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 TADA2BQ86TJ2 420 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 ARFGAP1Q8N6T3 406 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 EDEM1Q92611 657 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 CFAP57Q96MR6 1250 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 LRFN3Q9BTN0 628 aa16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 OLA1Q9NTK5 396 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-207ENST00000611723 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 F9P00740 461 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 DESP17661 470 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 COMTP21964 271 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 GNG11P61952 73 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 C15orf59Q2T9L4 293 aaPredicted RBP16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 HECTD3Q5T447 861 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 OTUD1Q5VV17 481 aaPredicted RBP16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 ANKRD54Q6NXT1 300 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 CC2D1AQ6P1N0 951 aaPredicted RBP16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 NT5DC3Q86UY8 548 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 DQX1Q8TE96 717 aaKnown RBP16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 RNF139Q8WU17 664 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 TBCBQ99426 244 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 CORO1BQ9BR76 489 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 C1QTNF1Q9BXJ1 281 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 ADAM33Q9BZ11 813 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 SMOC2Q9H3U7 446 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 AMFRQ9UKV5 643 aa16.66■□□□□ 0.26
CLTCL1-207ENST00000611723 DOCK6Q96HP0 2047 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 NOTCH4Q99466 2003 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 MYO16Q9Y6X6 1858 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 BDP1A6H8Y1 2624 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 TMEM110-MUSTN1A8MSY1 372 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 ZNF197O14709 1029 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 LINC01565O15544 149 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 TLR5O60602 858 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 LRCH4O75427 683 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 RNF8O76064 485 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 TRUB2O95900 331 aaKnown RBP16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 OAS1P00973 400 aaKnown RBP16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 RHOP08100 348 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 GABRR2P28476 465 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 GBP1P32455 592 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 SULT1E1P49888 294 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 HDAC4P56524 1084 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 NNTQ13423 1086 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 SH3PXD2AQ5TCZ1 1133 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 LRRC38Q5VT99 294 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 SYCE2Q6PIF2 218 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 GPR149Q86SP6 731 aa16.65■□□□□ 0.26
CLTCL1-207ENST00000611723 SLC35F6Q8N357 371 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms