RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CNGA4Q8IV77 575 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 DRC7Q8IY82 874 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 OSCP1Q8WVF1 389 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.02
CTSA-219ENST00000607841 ZFRQ96KR1 1074 aaKnown RBP14.91□□□□□ -0.02
CTSA-219ENST00000607841 SMOC2Q9H3U7 446 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 GKN1Q9NS71 199 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 DUS2Q9NX74 493 aaKnown RBP14.91□□□□□ -0.02
CTSA-219ENST00000607841 ADAM22Q9P0K1 906 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 WDR35Q9P2L0 1181 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 TJP2Q9UDY2 1190 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 GREB1Q4ZG55 1949 aa14.91□□□□□ -0.02
CTSA-219ENST00000607841 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 DOCK8Q8NF50 2099 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 MDM4O15151 490 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 CALB1P05937 261 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 SKILP12757 684 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
CTSA-219ENST00000607841 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
CTSA-219ENST00000607841 ACAD10Q6JQN1 1059 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 MSANTD2Q6P1R3 559 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 TRIM67Q6ZTA4 783 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 SLC26A9Q7LBE3 791 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 ZNF571Q7Z3V5 609 aaPredicted RBP14.9□□□□□ -0.02
CTSA-219ENST00000607841 XYLT1Q86Y38 959 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 SLC30A5Q8TAD4 765 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 ATP2A3Q93084 1043 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 OTUB2Q96DC9 234 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 SHDQ96IW2 340 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 FAM83CQ9BQN1 747 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 SYT11Q9BT88 431 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 DCLK3Q9C098 648 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 NAALADL1Q9UQQ1 740 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 ZNF510Q9Y2H8 683 aa14.9□□□□□ -0.02
CTSA-219ENST00000607841 HBS1LQ9Y450 684 aaKnown RBP14.9□□□□□ -0.02
CTSA-219ENST00000607841 AKR1B15C9JRZ8 316 aaPredicted RBP14.89□□□□□ -0.03
CTSA-219ENST00000607841 ARNTLO00327 626 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 MFAP3LO75121 409 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 NFATC1O95644 943 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 FYNP06241 537 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 IRF1P10914 325 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 GZMAP12544 262 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 GLULP15104 373 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 MLLT6P55198 1093 aaPredicted RBP14.89□□□□□ -0.03
CTSA-219ENST00000607841 CDK17Q00537 523 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 AMPD2Q01433 879 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 PRKCQQ04759 706 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
CTSA-219ENST00000607841 NR1H3Q13133 447 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 RUNX3Q13761 415 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 ARID5BQ14865 1188 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 SLC44A4Q53GD3 710 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 DCAF6Q58WW2 860 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 FAM102AQ5T9C2 384 aaPredicted RBP14.89□□□□□ -0.03
CTSA-219ENST00000607841 HGSNATQ68CP4 663 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 HTR3DQ70Z44 454 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 RIN3Q8TB24 985 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 PLD4Q96BZ4 506 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 MSANTD3Q96H12 275 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 VCPIP1Q96JH7 1222 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 ZFYVE19Q96K21 471 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 SERPINB11Q96P15 392 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 SLC2A13Q96QE2 648 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 DNAJC7Q99615 494 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 C11orf70Q9BRQ4 267 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTSA-219ENST00000607841 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 TMEM51Q9NW97 253 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 RRN3Q9NYV6 651 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 SFMBT1Q9UHJ3 866 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 WNT6Q9Y6F9 365 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 MYH10P35580 1976 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 MUC3AQ02505 3323 aa14.89□□□□□ -0.03
CTSA-219ENST00000607841 DAB1O75553 588 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 STC2O76061 302 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 HMBSP08397 361 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 COL9A1P20849 921 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 GBP1P32455 592 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 NOS2P35228 1153 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
CTSA-219ENST00000607841 RNASE9P60153 205 aaKnown RBP14.88□□□□□ -0.03
CTSA-219ENST00000607841 TBX2Q13207 712 aaPredicted RBP14.88□□□□□ -0.03
CTSA-219ENST00000607841 NNTQ13423 1086 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 TAF5Q15542 800 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 ITPRIPL2Q3MIP1 535 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 ARCQ7LC44 396 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 UNC45BQ8IWX7 931 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 DEFB106AQ8N104 65 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 CPA6Q8N4T0 437 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 DQX1Q8TE96 717 aaKnown RBP14.88□□□□□ -0.03
CTSA-219ENST00000607841 PIWIL1Q96J94 861 aaKnown RBP14.88□□□□□ -0.03
CTSA-219ENST00000607841 EBF3Q9H4W6 596 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 EPHX3Q9H6B9 360 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 C8orf33Q9H7E9 229 aaPredicted RBP14.88□□□□□ -0.03
CTSA-219ENST00000607841 ABHD10Q9NUJ1 306 aa14.88□□□□□ -0.03
CTSA-219ENST00000607841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.88□□□□□ -0.03
CTSA-219ENST00000607841 ADAMTS1Q9UHI8 967 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms